Gene MADE_04047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_04047 
SymbolpyrE 
ID6776608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp4357389 
End bp4358030 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content49% 
IMG OID642757498 
Productorotate phosphoribosyltransferase 
Protein accessionYP_002128331 
Protein GI196158842 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGT TTCAGCGAGA TTTTATCGAG TTTGCTATTG AACGTGGCGT ACTGAAGTTC 
GGCGAATTTA CGCTAAAATC GGGCCGCGTG AGCCCCTACT TCTTTAATGC TGGTTTGTTT 
AACCGCGGCG GTGATTTGGC CAAGCTGGGC CGCTTTTACG CCAATGCACT AATGGATGCC 
GGCGTTGAGT TTAACGTACT GTTTGGCCCG GCCTACAAAG GCATTCCTAT TGCCACTACG 
ACTGCCGTGG CGTTAGCGGA TAACCATAAC CTTGATGTGC CTTATTGCTT TAACCGCAAA 
GAAGCCAAAA CACACGGTGA AGGTGGCAAT CTAGTGGGAA GCCCGCTAGA GGGCAAGGTT 
ATGCTGGTGG ATGATGTGAT CACAGCCGGC ACTGCTATTC GTGAGTCTAT GACACTCATA 
GAGCAGCAGC AAGCAAGCCT GTCAGGCGTA CTTATCGCGT TAGATAGACA AGAGCGCGGT 
AAAGGCGAGC TCTCTGCGAT TCAAGAAGTA GAGCGCGACT TCAACACGCA GGTTATCTCG 
ATTGTTTCCC TTGCCGATGT GGTGTCATAC CTTGGTGAAA AAGGCGGTTT TGATAACGAG 
ATCGCTGCAA TAAACACCTA TCGTGAAAAC TATGGCATCT AA
 
Protein sequence
MKAFQRDFIE FAIERGVLKF GEFTLKSGRV SPYFFNAGLF NRGGDLAKLG RFYANALMDA 
GVEFNVLFGP AYKGIPIATT TAVALADNHN LDVPYCFNRK EAKTHGEGGN LVGSPLEGKV 
MLVDDVITAG TAIRESMTLI EQQQASLSGV LIALDRQERG KGELSAIQEV ERDFNTQVIS 
IVSLADVVSY LGEKGGFDNE IAAINTYREN YGI