Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_04004 |
Symbol | |
ID | 6778822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4311606 |
End bp | 4312250 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642757455 |
Product | uncharacterized secreted protein of SCO1/SenC/PrrC family |
Protein accession | YP_002128288 |
Protein GI | 196158799 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAC GAATCACTGT CGGCCTTGTT GCGTTTTTAG CACTTTGTGC TGGCATAGTC GGGGCGCTTT ATATTGCGCC CCCGAGTGTT GAAGGCGAGC CTGACTATTT TCAAACCTAC CCAGAACCAC GTGCTATATC GCCTTTTTCC TTGGTATCGC ATAAGGGCGA ACGCTTTGAT ACGTCGTCTT TAAAAGGCCA GTGGAGCCTT GTGTTTGTGG GCTATACCTT TTGCCCCGAC ATTTGCCCTA CTACCATGGC TGAGCTCAAT AATATTTACC CAGAACTTCA AGCCCTAAAT AGCGTCGAAC CAATTCGCAT TGTTTTTGTA TCTGTGGACC CAAAACGCGA CTCAGTTGAA AGACTGGCAG AGTATGTGAG CTATTTTAAT GAAGAGTTCA TTGCCCTTAC CGGCGAGCAT AAAACGCTTT TTCCCTTCGT ACGCAACTTG GGAATGATGT ATGCTATTGC AGAAAGTACC GACAACCCCA ATTATTTAGT TGATCACAGT GCGTCCGTTG TACTTATCGA CCCTGAAGCT AGGGTGATAG GAAGATTTAA ACCAAAAAGA GAGCCAGGAA AGCTATCGAT AAGTGATTCC CAGCAAATAT TGGCAGACAT GCCAGTAATT ATCTCAAAGC AGTAG
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Protein sequence | MNQRITVGLV AFLALCAGIV GALYIAPPSV EGEPDYFQTY PEPRAISPFS LVSHKGERFD TSSLKGQWSL VFVGYTFCPD ICPTTMAELN NIYPELQALN SVEPIRIVFV SVDPKRDSVE RLAEYVSYFN EEFIALTGEH KTLFPFVRNL GMMYAIAEST DNPNYLVDHS ASVVLIDPEA RVIGRFKPKR EPGKLSISDS QQILADMPVI ISKQ
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