Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03970 |
Symbol | |
ID | 6777723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4278298 |
End bp | 4278966 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642757421 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 family protein |
Protein accession | YP_002128254 |
Protein GI | 196158765 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGGTA CCCTGTTGGA CCTTCACTAT GACAATCAGT TCTGGTTGCA TCATTTACCA AAGCGTCTGG CTGAATTACG AGGGGTTTCA GAGGCGCAAA CTCAGCAAGA AATGTCTAAG CGCTACGAGG CAGTGTTTGG TCAAATTCAG TGGTATTGCC TCGATTATTG GGCCGAGTCA CTGGCACTCG ACTTAGAAAA CGAGTTTATG CCGCTAAAAC GGGAACTCGC CCATTTATTG GCACTTCGCG AAGACACCAT TCCATTCCTT GATGCGCTCC ATGGATCGGG CAGAGAAGTT GTGCTGGTCA CCAATGCTCA CCCTCATAGT TTGGCGCTTA AAATTGAGCA TACTCAGCTT GATTCTCACA TTGATAACTT AATTTCTACC CATGAGTTTG GTGTGACAAA AGAATCTCAG CTGCTATGGG AGCGATTACA AGCCCGGGTT GAATTTGACG CCAGTCGCAC GTTATTCGTC GATGACTCTC TTCCCATATT GAATGCAGCT AAGACTTACG GTATTAAGCA TTTACTGGCA GTAGATAACC CAGACAGCAC GTTGCCTAAT CGCAATATTA GTGAATTCCC GGCAGTGCGA GACTATCGCT TGATGCTTGA AGATATCAAA GCAAATCCAG TGACTAATGT CGCAAAAACA CGTTTTTGA
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Protein sequence | MDGTLLDLHY DNQFWLHHLP KRLAELRGVS EAQTQQEMSK RYEAVFGQIQ WYCLDYWAES LALDLENEFM PLKRELAHLL ALREDTIPFL DALHGSGREV VLVTNAHPHS LALKIEHTQL DSHIDNLIST HEFGVTKESQ LLWERLQARV EFDASRTLFV DDSLPILNAA KTYGIKHLLA VDNPDSTLPN RNISEFPAVR DYRLMLEDIK ANPVTNVAKT RF
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