Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03939 |
Symbol | |
ID | 6778119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 4243388 |
End bp | 4244986 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642757390 |
Product | bifunctionalphosphoribosylaminoimidazolecarboxa m ide formyltransferase/IMP cyclohydrolase |
Protein accession | YP_002128223 |
Protein GI | 196158734 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACAC CAAAACCAAT TAAACGTGCT CTTCTTAGTG TCTCTGATAA AACCGGTATC CTCGATTTCG CGACAGCGCT GCATAACGCT GGCGTTGAGC TTCTGTCGAC GGGCGGTACC GCAAAACTCC TTGCTGAAGC TGGTTTACCT GTAAAAGAGG TGTCTGATCA TACAGGTCAC CCAGAGATTA TGGCTGGTCG TGTTAAAACG CTTCACCCGA AAATTCATGG CGGTATTCTT GCTCGTCGCG GTGTTGACGA AGCGGTGATG GAAGAAAACA ACATTGCGCC TATCGACCTT GTGGTGGTTA ACCTTTACCC GTTTGCTGCT ACCGTGGCAA ACGAAGACTG TACGCTAGAA GATGCGATTG AAAATATTGA TATCGGTGGG CCAACGATGG TTCGCGCGGC AGCGAAAAAC CATAAAGATG TCACTATTGT TGTTAATGCG GCGGACTACT CTCGCGTTTT AGCTGAAATG AACGACAACA ACGGCTCATT GACATACAGC ACCCGTTTCG ACCTAGCCAT TAAAGCGTTC GAACACACGG CTGAATACGA CGGTATGATT GCCAACTACT TTGGTGCGCG TTTAGACAGC ACAGGATGCG AGGCAGACTG TGACCACCAG CACAGTGAAT TCCCGCGCAC CTACAACATA CAGCTGACTA AGAAGCAAGA CCTTCGCTAT GGTGAAAACA GCCACCAAGA AGCGGCGTTC TATGTTGAAA ACAACATTCA AGAAGCGTCG GTTGCTACTG CTACACAGCT TCAAGGTAAA GAACTGTCGT TTAACAATAT TGCTGACACC GATGCAGCGC TAGAGTGCGT TAAAGAATTC GAAGAGCCAG CATGCGTTAT CGTTAAGCAC GCCAATCCAT GTGGTGTTGC TATTGGCAAC GATATTCTAA CTGCCTACGA TCGCGCGTTT AAAACAGACC CAACGTCAGC ATTTGGCGGC ATTATCGCGT TTAACCGCGA GCTTGATGCA AAAACGGCAC ATGCCATCGT TGACCGTCAA TTCGTAGAAG TCATTATTGC CCCAGCGGTA AGCGATGAAG CAAAAGAAGT AGTAAGTGCG AAGAAAAACG TACGTCTTCT AGCGTGTGGT GACTGGGCTG GTCAGCTAAC TGAAGGTTAT GACTTTAAGC GCGTAAACGG CGGTTTATTA GTACAAGAGC GCGACTTCGG CATGGTTGAA ATGGAAGACC TTGAAGTAGT GACTAAGCGT AAGCCTAGCG AAGAAGAACT GCGCGACCTT ATGTTCTGCT GGAAGGTAGC AAAATACGTG AAGTCTAACG CGATTGTTTA CTGCAAAGAC GGTATGACGG TAGGCGTGGG CGCAGGTCAA ATGAGTCGCG TTTATTCTGC AAAAATTGCA GGTATTAAAG CAGCTGATGA GAACCTTGAA GTGGCTGGTT CTGTTATGGC GTCTGACGCT TTCTTCCCAT TCCGCGATGG TATAGACGCT GCTGCACATG CCGGTATTAA AGCGGTTATT CAGCCAGGTG GCTCTATGCG CGACCAAGAA GTGATTGATG CCGCTGACGA ACACGGCATT GCCATGGTGT TCACAGGTAT GCGTCACTTC CGTCACTAA
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Protein sequence | MQTPKPIKRA LLSVSDKTGI LDFATALHNA GVELLSTGGT AKLLAEAGLP VKEVSDHTGH PEIMAGRVKT LHPKIHGGIL ARRGVDEAVM EENNIAPIDL VVVNLYPFAA TVANEDCTLE DAIENIDIGG PTMVRAAAKN HKDVTIVVNA ADYSRVLAEM NDNNGSLTYS TRFDLAIKAF EHTAEYDGMI ANYFGARLDS TGCEADCDHQ HSEFPRTYNI QLTKKQDLRY GENSHQEAAF YVENNIQEAS VATATQLQGK ELSFNNIADT DAALECVKEF EEPACVIVKH ANPCGVAIGN DILTAYDRAF KTDPTSAFGG IIAFNRELDA KTAHAIVDRQ FVEVIIAPAV SDEAKEVVSA KKNVRLLACG DWAGQLTEGY DFKRVNGGLL VQERDFGMVE MEDLEVVTKR KPSEEELRDL MFCWKVAKYV KSNAIVYCKD GMTVGVGAGQ MSRVYSAKIA GIKAADENLE VAGSVMASDA FFPFRDGIDA AAHAGIKAVI QPGGSMRDQE VIDAADEHGI AMVFTGMRHF RH
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