Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03867 |
Symbol | |
ID | 6776917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 4166280 |
End bp | 4167278 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642757318 |
Product | putative protease |
Protein accession | YP_002128151 |
Protein GI | 196158662 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTAC TATGCCCTGC GGGTAACCTC TCTTCTTTTA AAATGGCGAT CGATAATGGC GCAGATGCGG TCTACGTGGG TTTAAAGAAT GATACGAATG CCAGGCACTT TGCGGGTCTT AATTTTACTG AAGAAAGACT GGAAGAAGCC GTCTCTTACG CACACGACAG ATCAAAAAAG ATACATATCG CTATTAATAC CTATGCGCAT GCTGAACAAT GGGATAAGTG GAAATTCGCT GTCGATGCCG CCGCAGCGCT CAATATTGAT GCCCTGATAG TTGCCGACAT GTCAGTACTT AGTTATGCAG CTGAGCGTTA CCCAGATTTA GAGTTGCATT TATCCGTGCA GGCATCTGCA ACCAATGCAG GTGCTATCGA ATACTACCAA GAGTGCTTCA ATGTGAAGCG AATCGTCCTC CCGCGCGTAC TTTCAATTCA TCAGGTAAAG CAGTTAGCGA GATGTACCAA TATTGAACTG GAGGTCTTTG CATTTGGTAG TCTATGCATC ATGGCCGAAG GACGCTGCCA CCTTTCTTCG TATCTAACCG GTGAGTCACC CAATATGAAT GGTGTGTGTT CACCAGCAAG TCATGTTCAG TGGCAGGAGT CGGATGGTCG TTTAACATCC AGATTGAACA ATGTCTTAAT TGATTCCTAT CAACCACATG AGCAAGCAGG TTATCCAACT CTCTGCAAGG GGCGTTTTCA GGTAGATAGC AATACTAAAG CGTTTCATGC ACTGGAAGAA CCTACTAGCC TAAATACGCT GAGTCTGCTA CCTGAATTGT TTAAAATTGG CGTGAACGCC TTAAAAATTG AAGGTAGGCA ACGAAGTAGT GCCTATGTAA AACAGGTAAC TAGAGTTTGG CGCGATGCTA TTGACCACTG CAGTAGCTCC ATGCATGTAA ACGATCTGCA TGATTGGGAA AAACGTCTGG AATCCTTATC GGAGGGAAGC TGCACTACTT TGGGTGCCTA CCACAAGTCG TGGCAATAG
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Protein sequence | MELLCPAGNL SSFKMAIDNG ADAVYVGLKN DTNARHFAGL NFTEERLEEA VSYAHDRSKK IHIAINTYAH AEQWDKWKFA VDAAAALNID ALIVADMSVL SYAAERYPDL ELHLSVQASA TNAGAIEYYQ ECFNVKRIVL PRVLSIHQVK QLARCTNIEL EVFAFGSLCI MAEGRCHLSS YLTGESPNMN GVCSPASHVQ WQESDGRLTS RLNNVLIDSY QPHEQAGYPT LCKGRFQVDS NTKAFHALEE PTSLNTLSLL PELFKIGVNA LKIEGRQRSS AYVKQVTRVW RDAIDHCSSS MHVNDLHDWE KRLESLSEGS CTTLGAYHKS WQ
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