Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03737 |
Symbol | fadA |
ID | 6778258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 4039701 |
End bp | 4040864 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642757190 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_002128023 |
Protein GI | 196158534 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02445] fatty oxidation complex, beta subunit FadA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAG TGGTCGTAAT CGATTGCGTA CGTACCCCAA TGGGTCGTTC AAAAAACGGT GTTTTCAAAA ATGTGCGTGC AGAAGACCTA TCTGCAGCAC TAATGACCGC GCTACTAGAG CGTAACCCTG GCGTAAATCC AGCGGAAATT GAAGACATCA TTTGGGGCTG TGTTCAGCAA ACTAAAGAAC AAGGCTTCAA CGTTGCACGT AACGCGCAAC TACTCACAAA AATTCCACGC ACAACGGGCG CGGTAACGGT TAACCGTTTA TGTGGTTCAT CAATGCAAGC CCTTCACGAT GCAACAAGCG GCATCATGAG CGGCCGTGGT GACATTTACA TGATTGGTGG TGTTGAGCAC ATGGGTCACG TACCGATGAA CTACAACATC GACTTCCACC CAGGTCTTGC CAAGTACACA GCGAAAGCGT CGGGTATGAT GGGTATGACA GCCGAGCTAC TTGGCCGTCA AAATGGTATT ACTCGTGAGC AACAAGACGC TTTTGGCGCA CGTTCGCATC AGCTAGCGCA CAAAGCACAC CTTGAAGGCC GCTGGGCTAA CGAGATTGTG CCTGTTGAAG GTCACGATGC AAACGGCGTA TTAAAGCTAA TTGACTACGA TGAAGTAGTA CGCCCAGAGA GTACTGCTGA GAGCATGGCG GCGCTTCGCC CAGTGTTTGA CCCAGTAAAC GGAACCGTAA CTGCGGGTAC GTCTTCTGCG TTGTCTGACG GTGCATCAGG TATGCTACTT ATGTCAGCAG ACCGTGCGAA AGCACTTGGC CTAACGCCAC GTGCGAAAAT TCGCTCGATG GCTGTGGCGG GTTGTGATGC GGCAATTATG GGCTACGGCC CAGTGCCAGC AACACAAAAA GCCCTTAAGC GCGCTGGCCT AACTATGGAC GATATTGAAC TTGCTGAGTT TAACGAAGCG TTCGCTGCAC AGGCACTATC GTGCATTAAG CAACTAGGTT GGATGGACCA CCTAGATACT AAGATTAACC TTAACGGTGG TGCTATTGCA CTTGGTCACC CGCTAGGTTG TTCTGGTTCA CGTATCTCAG GTACGCTTAT CAACCTAATG GAATCACAAG ACGTAAGCCT AGGCTTAGCG ACTATGTGTA TTGGTTTAGG CCAAGGTATT GCTACCGTAT TTGAGCGTGT ATAA
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Protein sequence | MKEVVVIDCV RTPMGRSKNG VFKNVRAEDL SAALMTALLE RNPGVNPAEI EDIIWGCVQQ TKEQGFNVAR NAQLLTKIPR TTGAVTVNRL CGSSMQALHD ATSGIMSGRG DIYMIGGVEH MGHVPMNYNI DFHPGLAKYT AKASGMMGMT AELLGRQNGI TREQQDAFGA RSHQLAHKAH LEGRWANEIV PVEGHDANGV LKLIDYDEVV RPESTAESMA ALRPVFDPVN GTVTAGTSSA LSDGASGMLL MSADRAKALG LTPRAKIRSM AVAGCDAAIM GYGPVPATQK ALKRAGLTMD DIELAEFNEA FAAQALSCIK QLGWMDHLDT KINLNGGAIA LGHPLGCSGS RISGTLINLM ESQDVSLGLA TMCIGLGQGI ATVFERV
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