| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03716 |
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| Symbol | |
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| ID | 6777950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4013773 |
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| End bp | 4017570 |
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| Gene Length | 3798 bp |
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| Protein Length | 1265 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642757169 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_002128002 |
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| Protein GI | 196158513 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.933715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCATAA ACGATACACT TCATACTACT TCACCGCTAC GCCAGCGTAT CAGAGACTAC
TATCGCATTA GCGAGTCTGT GGCTGTAGAC CAAATTCTTC CCATTGCCGA GGTAAACCCT
CGTGCACGAA GCCGTGCGTG GGAACGTGCA CGTAAGATGG TGCTTCAAAT TCGCCGTGAA
CAAGAAGGCC ACGGTGGCGT AGATGCGTTA TTAAACGAAT ACTCGCTATC TACTGCAGAA
GGCGTAGTGT TGATGTGTTT GGCTGAAGCC TTACTGCGTG TACCAGATCG CGCGACACAA
GATGAACTCA TCCGAGACAA ACTTTCAAAA GGGCAGTGGA CACCACATTT GGGGAATTCT
GACTCTCTGT TTGTGAACGC GTCAGCATGG GGCCTGTTGT TCACTGGCAA CATGGTCAAT
TATGCCGACA AGCGTAAAAA AGAGCAGTTT GGCTTATTGA AGCAAACGAT TGGCCGTTTA
GGTGAGCCTG TTATTCGCCG AGCAATGAAT ATTGCAATGC GCGTTATGGG CCGTCAATTC
GTCATGGGTG AAACTATCGA GGATGCGGTA GACCGCGCCA AAGAGAAAGA AACGAAAGGG
TATGTGTACT CTTACGATAT GCTAGGTGAA GGCGCGCGTA CCATGCGTGA TGCTGACCGC
TATTATGACG CATACGTAAA GGCTATCAAG GTTATCGGTA AAGCGGCAAA TGGCCGTGGT
CCGAAACGCT CTCCGGGTAT TTCCGTGAAG CTTTCTGCTA TTCATCCGCG CTTTGAATTC
TCTCATCGCG AGCGTGCCAT GGTCGACATT CCACCGCGCT TAAAAGCCCT TTGTATGATG
GCAAAAGAGT ATGATATCGG TCTAACAGTA GATGCTGAAG AAGCCGACCG CTTAGAGCTT
TCTTTAGACA TTATTGAAGC GGTGTTCCGC GATGACGATC TCAACGGCTG GACTGGCTTT
GGTTTGGCGG TGCAAGCTTA TCAAAAGCGC GCAATTCACG TTATCGAACA TTTACGTAAC
CTAACGTTAG AAGTGGGCCG ACCATTGATG GTGCGCTTAG TTAAGGGTGC ATATTGGGAT
ACCGAAATTA AGCTTACCCA GCAGGCGGGC CTTGAAGAGT TTCCTGTATT TACTCGTAAG
TCGTCAACAG ATGTGTCGTA TCACGCCTGT GCGAACCGCT TGCTTGAGTA CCGCGATACT
ATCTATCCGC AGTTTGCTAC GCACAACGCC TACACCGCTT CTGTTATCGT AGAGCTTGCT
GGCGACGATA AAGAAGGGTT CGAATTTCAA TGCCTGCACG GCATGGGCGA TACCCTTTAC
GATCAAGTCG TGACAGAAGA TAAGATTCAG TGCCGTGTTT ATGCGCCGGT GGGAGAGCAT
GAAGACTTAT TGGCTTATCT TGTTCGTCGT CTTCTTGAAA ATGGAGCGAA CTCGTCGTTT
GTAAACGCTA TTGTTGATGA TGAAAAGCCT GTTGAGTCAC TACTTGAAGA CCCGGTAGAG
AAAACGCAGC GCCTCAAAGT TCGCTACAAT AAGCTTATTA AAACGCCTCG TGGTTTGTAC
GCGCCAGAGC GTGATAACTC ACGTGGTTTA GACCTTACTG ACACCAACGC GGTTACTGCA
CTTAAGCATG AACTAGAGCG TTGGCAGGAT TACTACAAAG TCACCGATGA GGTGCCAGAA
GGGGCAACAC CTGTACTTAG CCCAACCGAC CATACTGACA TTGTTGGTTA TCATTACTAC
GCTACGCCAG ACGACATGCG TAAGGCGCTA GACGACACAG ATGCAGGTTT TGAAGCTTGG
TCGAAGCGAG ATGTCAGCGA AAGGGCAGAA ATTCTTAATC GTACGGCAGA TGCGCTAGAG
CGTCACATGG CCGAGCTTAT TGCTATTTGT ATGCGTGAAG CGGGTAAAGT AGCGCAAGAT
AGCATCGACG AAGTCCGTGA AGCGGTAGAT TTTTGTCGTT ATTATGCAGT ACGCGCCGAA
GAGCTTGCTG AAGATCAGCG TTTACTTCCC CGTGGTGTGG TGCTGTGTAT TAGCCCATGG
AACTTCCCAC TGGCAATTTT CCTAGGACAA GTTGCCGCCG CGCTTGTTAC GGGGAACACG
GTAGTGGCTA AGCCTGCAGA GCAAACCAGT ATCGTTGCGC AGCGCGCAGT CGATATTATG
CACTCGGTAG GTTTACCCGA AGATGCATTG AAGCTAATTG TATCGCCAGG TAAAGAAGTC
GGTGAAACGC TGCTGCCTGA TGAGCGTATT AAAGCCGTCA TGTTCACGGG CTCAACGCAA
ACCGGTACGC TAATTTCGCA AGTATTGGCA GAGCGAGGTG GTGAGCAGGT ACCGCTTATT
GCAGAAACCG GCGGTCAAAA CTGTATGATG GTAGACTCAA CGGCCTTGCC AGAGCAGGTG
GTTGACGATG TAATCCATTC TGGGTTCCAA AGTGCGGGCC AGCGATGTTC AGCACTGCGC
GTGTTGTTTG TTCAAGACGA CATTGCCGAT GAACTAACCG AAATGTTAAT CGGCGCACTT
AAAGAGCTAA CGGTGGGAGA TCCCACGCAG CTAGCTACCG ACGTCGGCCC GGTTATTGAC
GAAAAAGCAC TGAAAAGCCT GACAGACCAC CAAGACTATA TGGAAGGTAA AGGTAAGTTG
CTCTATCGCA GTGAAATGCC AAAAGGGTTT GAAAACGGTA CGTTCTTCGC GCCTACGCTT
TATGAAATTG AAAATATCGA TGTTCTTGAG CGAGAAGTAT TTGGACCGGT TGTTCATATT
GTTCGCTTTA AGTCAAAAGA GCTCGACAAC GTGCTTGAGC AAATCAATGG TACAGGTTAC
GGCCTGACGA TGGGTATTCA CTCGCGCATT GAAGAGCGTG CTAACGAGTT AGCAGCGAAG
AGCCGTGCGG GCAACGTTTA TATCAACCGC AATATGATTG GGGCAATTGT TGGCGTTCAG
CCCTTTGGTG GGCGCGGGCT TTCTGGTACT GGTCCGAAAG CCGGTGGTCC AAACTATCTG
CCTCGTCTAA TGATGGAACG CGCCACACCC AAGCCGTCTC ATATCGATGA TGTAGATGGT
ACCGATGCAG CGCTTATCGG GGATGAGAAA ATTGCCGAGC GTGCCCACGT AATGATGGAC
AAGGCTAAAG CCGTTGAAAT CCAATGGCGT CACACGCCTA TCAACGATCG CATCTCAATG
GTACGCCAAT TATTGGCTAA AATTGCCAAG GTAGATATTG TCGATGACTT GGCCGACGAC
TTGAACCGCA CGTTGGCAAC GGCTCGTCAG CAATTAACCA GCGTAGAGCG TAAATTGGCT
AAAGCTCAGA CTTTGCCTGG CCCAACGGGT GAATCCAACA AGCTTTACTT AGAGCCGCGC
GGTATCCTGG TATGTTTCGC CGATAAAGAA GTAACGTTTG AATACTGGTT GCTGTCTATT
GTCACTGCGC TTTCTACCGG TAACCCCGTA GTGTCAGTCG TCTCTGAAAT CTTCTATGAA
GAAGCTGTAG AAATTCAGAA CAAGTTTGAG TCAACGGGTG CCCCGAAGGG ATTATTCCAA
GTCGCTCGTC TTGCGCATTT AGATACGCTA TTAATGGATG AAGACTTATC GGGTGTGGTT
GTTGACTCAA GTACTGAGCG TACGGCGCGT ATCACGGCTA TGCTGTCGTC GCGCGAAGGG
GCTATCTTGC CGGTTATTAC CGCCGAGTAT AACGATAACC TTATTCAGCG CTTGATGACT
GAGAAAACCA TCAGTATCGA TACTACGGCA TCCGGTGGCA ACACCTCGTT GATGACCTTA
GTAGAAGATG ATGAATAA
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| Protein sequence | MLINDTLHTT SPLRQRIRDY YRISESVAVD QILPIAEVNP RARSRAWERA RKMVLQIRRE
QEGHGGVDAL LNEYSLSTAE GVVLMCLAEA LLRVPDRATQ DELIRDKLSK GQWTPHLGNS
DSLFVNASAW GLLFTGNMVN YADKRKKEQF GLLKQTIGRL GEPVIRRAMN IAMRVMGRQF
VMGETIEDAV DRAKEKETKG YVYSYDMLGE GARTMRDADR YYDAYVKAIK VIGKAANGRG
PKRSPGISVK LSAIHPRFEF SHRERAMVDI PPRLKALCMM AKEYDIGLTV DAEEADRLEL
SLDIIEAVFR DDDLNGWTGF GLAVQAYQKR AIHVIEHLRN LTLEVGRPLM VRLVKGAYWD
TEIKLTQQAG LEEFPVFTRK SSTDVSYHAC ANRLLEYRDT IYPQFATHNA YTASVIVELA
GDDKEGFEFQ CLHGMGDTLY DQVVTEDKIQ CRVYAPVGEH EDLLAYLVRR LLENGANSSF
VNAIVDDEKP VESLLEDPVE KTQRLKVRYN KLIKTPRGLY APERDNSRGL DLTDTNAVTA
LKHELERWQD YYKVTDEVPE GATPVLSPTD HTDIVGYHYY ATPDDMRKAL DDTDAGFEAW
SKRDVSERAE ILNRTADALE RHMAELIAIC MREAGKVAQD SIDEVREAVD FCRYYAVRAE
ELAEDQRLLP RGVVLCISPW NFPLAIFLGQ VAAALVTGNT VVAKPAEQTS IVAQRAVDIM
HSVGLPEDAL KLIVSPGKEV GETLLPDERI KAVMFTGSTQ TGTLISQVLA ERGGEQVPLI
AETGGQNCMM VDSTALPEQV VDDVIHSGFQ SAGQRCSALR VLFVQDDIAD ELTEMLIGAL
KELTVGDPTQ LATDVGPVID EKALKSLTDH QDYMEGKGKL LYRSEMPKGF ENGTFFAPTL
YEIENIDVLE REVFGPVVHI VRFKSKELDN VLEQINGTGY GLTMGIHSRI EERANELAAK
SRAGNVYINR NMIGAIVGVQ PFGGRGLSGT GPKAGGPNYL PRLMMERATP KPSHIDDVDG
TDAALIGDEK IAERAHVMMD KAKAVEIQWR HTPINDRISM VRQLLAKIAK VDIVDDLADD
LNRTLATARQ QLTSVERKLA KAQTLPGPTG ESNKLYLEPR GILVCFADKE VTFEYWLLSI
VTALSTGNPV VSVVSEIFYE EAVEIQNKFE STGAPKGLFQ VARLAHLDTL LMDEDLSGVV
VDSSTERTAR ITAMLSSREG AILPVITAEY NDNLIQRLMT EKTISIDTTA SGGNTSLMTL
VEDDE
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