Gene MADE_03714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03714 
Symbol 
ID6777998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4012432 
End bp4013208 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content45% 
IMG OID642757167 
ProductSH3, type 3 
Protein accessionYP_002128000 
Protein GI196158511 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000284257 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCGC TAAGCACAGC TGATGATGCT GACACCTTAC CTTTGTCACT TAGTTTTCGC 
AATGCTACAA CACCTTTCTT AGGTGCTAAA TTTAGACAAA AGTGGAACAA ACTTGCCTTT
ATCGCGGTCA ACCAATACCA TCTTCACGTT TTAAATTCTA AAATTGGACT TCATATGATT
CGAAAGTGGT TAGCAGCAGC CCTTATTGCG TGCTCTTTTC AAGCATTTTC GCTACAAGAT
ATCGCTGATT TAGAAGCGTC TTCTTCACAT TACATTCGAG ATGACTTATT TATCTTCGTG
CATACTGGGC CTGGCCGTAA TTACCGTATT TTAGGGTCAA TTGAAGCAGG TACCCCCATT
ACGGTACTTG CTAGAGATAA CGATGCCGAG TTCACACAAA TTACCGATCC GGAAGGTCGT
AAAGGCTGGG TAGAAAGTAA ATTTGTGTCG AATACTATGT CACAAGCAGA GCAGCTTCCT
ATCATCAGCG AGAAACTGGC AGAGAGCCAG AGCAGTCTGC AGACCTTACA GTCTGACAAC
GCAAAGCTCC GTCAGCAGCT AAACGATGCA CGTCAGCAAG TATCGAAACT TACCACGACG
AATGACGAGC AAGCCTCGCA AATTATTCGT TTAACGGCGA AGGTTGAAAG CGCGAATAAA
GATGAGCTAG TAATGTGGTT TACCCGCGGC GGAATAGTGG CTGGCATCGG TATTTTGCTA
GGCGTAATGC TAACCTATCT GCCAAAGCGC AAGCGCCGAA GCAGTGAATG GATGTAA
 
Protein sequence
MVALSTADDA DTLPLSLSFR NATTPFLGAK FRQKWNKLAF IAVNQYHLHV LNSKIGLHMI 
RKWLAAALIA CSFQAFSLQD IADLEASSSH YIRDDLFIFV HTGPGRNYRI LGSIEAGTPI
TVLARDNDAE FTQITDPEGR KGWVESKFVS NTMSQAEQLP IISEKLAESQ SSLQTLQSDN
AKLRQQLNDA RQQVSKLTTT NDEQASQIIR LTAKVESANK DELVMWFTRG GIVAGIGILL
GVMLTYLPKR KRRSSEWM