Gene MADE_03710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03710 
Symbol 
ID6777992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4008359 
End bp4008847 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID642757163 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_002127996 
Protein GI196158507 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.626729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCAAG TATTTTGGGC AAGACGTTAT GGTCAACATT CATGGCAGTT CCCTCAAGGC 
GGAATTGATG AAGGGGAATC TGCTGAACAA GCTATGTACC GGGAGCTTCA CGAAGAAGTA
GGGCTGACAC CGAAAGATGT CACCATTTTA AGTGTTACCC GTAACTGGCT TAGATATAAG
CTGCCAAAGC GATTAATTCG ACAAGGTAGT AACCCTGTTT GTATAGGGCA AAAACAAAAA
TGGTTCTTGT TGCAGCTAGA TTGCAACGAG CGCGATGTTA ATGTGCTTAA AACAGGTCAT
CCTGAATTTG ATGACTGGAG GTGGGTAAGT TACTGGTATC CTATTAGGAA CGTTGTATCG
TTTAAGCGGG ATGTTTACAG GCGGGTAATG AAGGAATTTT CACCTGTTGT TATGTCTGCC
CAGCAGCGCC CTTTGCAGCG TCAAAACGCA GCGCCACATA AGCGTGGAAA AAAGCGCAGG
CGTGGCTAA
 
Protein sequence
MGQVFWARRY GQHSWQFPQG GIDEGESAEQ AMYRELHEEV GLTPKDVTIL SVTRNWLRYK 
LPKRLIRQGS NPVCIGQKQK WFLLQLDCNE RDVNVLKTGH PEFDDWRWVS YWYPIRNVVS
FKRDVYRRVM KEFSPVVMSA QQRPLQRQNA APHKRGKKRR RG