| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03693 |
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| Symbol | |
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| ID | 6777858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3985947 |
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| End bp | 3987716 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642757146 |
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| Product | ATP-dependent RNA helicase |
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| Protein accession | YP_002127979 |
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| Protein GI | 196158490 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAA CTGTCGACAT GACATTTAAA GACCTCAATT TACCAGAACC AATCTTACAA
GCCCTTGAAA AAGTTGGCTA CGAGAAACCG TCTCCTATTC AAGCTGAGAG TATTCCTCTT
TTACTTGAAG GACACGACTT ACTCGGTCAG GCACAGACAG GGACAGGAAA AACCGCTGCG
TTTGCCCTGC CCATGTTGGC AAATATCGAT CCTGAGCAAC GTAAGCCGCA ATTACTGGTA
TTGGCCCCAA CCCGTGAATT AGCAATTCAG GTTGCAGAGG CGTTTCAGGT TTATGCGAGC
TTTAGTCAAA AAATTAAAGT ACTTCCCGTA TACGGCGGCC AGTCGTACGA CAACCAAATT
CGCCAGCTTA AGCGCGGCGT GCAAGTGGTT GTTGGTACAC CAGGGCGTAT CATCGACCAT
ATCAAGCGCA AAACACTAGA CTTAAGCGAA CTTAAGTATT TAGTGCTAGA TGAAGCAGAT
GAAATGCTTC GCATGGGCTT TATCGATGAC GTTGAGCTTA TTCTTAGCCA CGCGCCAGAA
GAGCGCCAAA CTGCGCTGTT CTCGGCAACC ATGCCTGGCC CAATCAAGAA GATTACCCAG
CGCTATTTGA AAGATCCTAA GCACGTCAAA ATTGCGTCTA AGGTAAGCAC TGCCAGCACC
ATTCGCCAGC GTTACTGCCA AATCGCACCG CACCACAAAC TTGAAGCGCT AACCCGCATC
ATGGAAGTGG AAGTGTTCGA CGGTATGATT ATTTTCGTAC GCACGAAAAC CGCTACCGTG
GAACTTGCCG ATAAGCTATC TGCCCGTGGT TACGATGTAG AACCACTAAA CGGTGATATT
CCTCAGGCAG CCCGTGAGCG TACTGTTGAA AAGCTTAAAC AGGGTAAAAT CGACATTCTT
GTAGCTACTG ACGTAGTAGC CCGAGGTCTT GACGTTGAGC GTGTAAGCCA CGTTATCAAC
TACGATATCC CGTATGACAG TGAGTCTTAC GTACACCGTA TTGGTCGTAC CGGTCGTGCT
GGTCGTCAAG GTGATGCAAT CCTATTTATT TCTCACCGCG AAAAGCGCTT GTTGTTCTCT
ATCGAGAAAA CCACTAAACA GCCTATTGAA GCGATGCCTA TTCCTTCAAT CAGCGAAATC
AATGAGACAC GCTTAAGCCG TTTCAAACAG TCGGTTGCCG AAGCAACGCA AGACGATAGC
ATTGAATCAT TAATGCCTAT TGTTGAGATG ATTAAAGAAG AAAACGAAGC ATCGCCTGAA
ACCATCATGG CTGCGCTACT TAAAATTGCG CAAGGCGACG AGCCGTTAAT TCTTAAAGAA
TCAGATCGAC CAGACATCAA CAGCAAGCCT CCACGCGATA ATCGTGATAG AAACTCTCGC
GATGGTCGTG ATGGCCGCGA AAGAAAGCCA AGAGTACCAC GTGGTAACCG CAAGCCAGAA
GAAGGCATGC AGCGCTTCCG TATTGAAGTA GGTCATGTTC ACGGCGCTAA GCCTGGCAAC
ATCGTTGGCG CTATTGCGAA CGAAGCAAAC ATAAACTCGA AGCACATTGG CGCTATCGAG
ATTTATGATA ACTTCAGTAC TGTTGATTTA CCTGACGGTA TGCCAAAAGA AACCCGTGAC
ACCCTTTCGG GCACACGCGT AGCAGGTCAG CGATTGAACA TTCGTGAATG GTCAGACACG
CCACCTAAGC GCGACGGTCG TGGAAGCCGC GGTGACAAAG GTGATCGTGC ACCTAGAGGC
AACCGTGAAA ACCGTAAACG TAAGAACTAA
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| Protein sequence | MTTTVDMTFK DLNLPEPILQ ALEKVGYEKP SPIQAESIPL LLEGHDLLGQ AQTGTGKTAA
FALPMLANID PEQRKPQLLV LAPTRELAIQ VAEAFQVYAS FSQKIKVLPV YGGQSYDNQI
RQLKRGVQVV VGTPGRIIDH IKRKTLDLSE LKYLVLDEAD EMLRMGFIDD VELILSHAPE
ERQTALFSAT MPGPIKKITQ RYLKDPKHVK IASKVSTAST IRQRYCQIAP HHKLEALTRI
MEVEVFDGMI IFVRTKTATV ELADKLSARG YDVEPLNGDI PQAARERTVE KLKQGKIDIL
VATDVVARGL DVERVSHVIN YDIPYDSESY VHRIGRTGRA GRQGDAILFI SHREKRLLFS
IEKTTKQPIE AMPIPSISEI NETRLSRFKQ SVAEATQDDS IESLMPIVEM IKEENEASPE
TIMAALLKIA QGDEPLILKE SDRPDINSKP PRDNRDRNSR DGRDGRERKP RVPRGNRKPE
EGMQRFRIEV GHVHGAKPGN IVGAIANEAN INSKHIGAIE IYDNFSTVDL PDGMPKETRD
TLSGTRVAGQ RLNIREWSDT PPKRDGRGSR GDKGDRAPRG NRENRKRKN
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