| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03685 |
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| Symbol | |
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| ID | 6777742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3975183 |
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| End bp | 3977078 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642757138 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_002127971 |
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| Protein GI | 196158482 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATC AATACAATTC AGATGCCATC GAGGTCTTAA ATGGCCTTGA CCCAGTTAAG
CGCCGCCCTG GTATGTATAC CGATACCACT CGTCCTAATC ACTTAGGGCA AGAGGTGATT
GATAACAGTG TGGATGAAGC GCTTGCGGGT CACGCCTCGA GCATCAAAGT AATTTTGCAC
GAAGATCAAT CGCTAGAAGT CATTGATGAC GGTCGTGGTA TGCCAGTAGA TATTCACCCT
GAAGAGGGGA TATCGGGCGT AGAACTTATC TTATGCAAAC TGCACGCTGG TGGTAAGTTT
TCCAATAAAA ACTATGCGTT CTCAGGCGGC TTGCACGGGG TAGGTATCTC GGTAGTCAAC
GCCCTTTCAA ATCGCGTTGA AGTGACTATT CGAAGAGACA GCAGCGTTTA TCAAATTGCA
TTTGAAAATG GCGACAAAGT AGAAGACTTG CAGGTCATTG ATACCTGTGG CAAACGCAAT
ACCGGTACGC GAGTCCACTT TTGGCCGGAC CCACAATACT TCGATTCGGC CAAGTTTTCG
GTAAGTCGCT TGAAACACAA CTTGCGCGCA AAAGCGGTGT TAAGCCCTGG CCTACGTATT
CGCTTTGACA ACAAAATCGC TAAAGAAAGC CAAGAATGGT TTTACGAAGA CGGCTTAAAA
GATTACCTCT ACCAAGCCGT TGAAGAATTT GAAACACTGC CGTCAGACAC GCCGTTTGTT
GGCAACTTCA CCGGCAATAC GGAAGCCGCT GACTGGGCAG TAATGTGGCT GCCCGAGGGC
GGCGACTTAG TAACAGAAAG TTACGTTAAC CTTATTCCTA CAGCCCAAGG CGGTACACAC
GTTAACGGGC TGCGCCAAGG CCTGCTTGAG TCGATGCGCG AATTCTGTGA GTTTAGAAAC
TTAATGCCGC GGGGCGTAAA GCTATCACCC GACGATATTT GGGACCGATG CGCCTATATC
CTGTCGACGA AAATGCAAGA TCCACAGTTT GCAGGACAAA CCAAAGAGCG CTTGTCATCA
CGCCAAGCCA GTGCGTTCGT ATCTGGTGTG GTTAAAGATG CATTCAGTCT ATGGCTAAAT
CAGCACACGG AAATTGCCGA AGCGTTGGCA GAAATGTGTA TCAACAACGC GCAGCGCCGC
TTACGCCAAA CCAAGAAAGT CGCGCGTAAG AAGGTAACGC AAGGGCCAGC GTTACCAGGA
AAGCTCACTG ACTGCTCTTC ACAAGATATC TCTTACTCTG AGCTGTTTCT AGTAGAGGGT
GACTCGGCAG GAGGCTCGGC TAAACAGGCT CGCGACAGAG AGTTTCAGGC GATCATGCCG
CTGCGCGGTA AAATCCTGAA TAGCTGGGAA GTCGACTCTT CTCAGGTACT GGCATCACAA
GAAATTCACG ATATTTCAGT GGCGCTAGGT ATTGACCCTG ATTCAACAGA CCTGTCTGGT
TTACGCTACG GCAAAATTTG TATTCTTGCC GATGCTGACT CTGATGGGCT TCATATTGCA
ACCTTATTAT GCGCGTTGTT CGTACGCCAC TTTAGAACCC TTGTCGAGCA AGGTCATGTG
TACGTCGCTA TGCCGCCGCT ATTTAGAATA GACGTAGGCA AAGAGGTGTA TTACGCGCTA
GATGAAGGCG AAAAGCAGGG CATTCTAGAT CGTATTGAAG CAGAAAAGAA ACGGGGTAAA
GTGAACGTAC AGCGCTTTAA AGGCCTAGGT GAAATGAACC CGCTGCAGCT TCGCGAAACC
ACCATGGACC CTAATACTCG CCGCCTTGTT CAGCTGACGA TTGAAGATGC TGAAGAAATG
ATGGAGCTTA TGGACATGTT GCTTGCTAAG AAGCGTTCTG GCGATCGCAA GACTTGGCTA
GAAAGCAAAG GAAATATGGC AGAAGTCGTG TTGTAA
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| Protein sequence | MSNQYNSDAI EVLNGLDPVK RRPGMYTDTT RPNHLGQEVI DNSVDEALAG HASSIKVILH
EDQSLEVIDD GRGMPVDIHP EEGISGVELI LCKLHAGGKF SNKNYAFSGG LHGVGISVVN
ALSNRVEVTI RRDSSVYQIA FENGDKVEDL QVIDTCGKRN TGTRVHFWPD PQYFDSAKFS
VSRLKHNLRA KAVLSPGLRI RFDNKIAKES QEWFYEDGLK DYLYQAVEEF ETLPSDTPFV
GNFTGNTEAA DWAVMWLPEG GDLVTESYVN LIPTAQGGTH VNGLRQGLLE SMREFCEFRN
LMPRGVKLSP DDIWDRCAYI LSTKMQDPQF AGQTKERLSS RQASAFVSGV VKDAFSLWLN
QHTEIAEALA EMCINNAQRR LRQTKKVARK KVTQGPALPG KLTDCSSQDI SYSELFLVEG
DSAGGSAKQA RDREFQAIMP LRGKILNSWE VDSSQVLASQ EIHDISVALG IDPDSTDLSG
LRYGKICILA DADSDGLHIA TLLCALFVRH FRTLVEQGHV YVAMPPLFRI DVGKEVYYAL
DEGEKQGILD RIEAEKKRGK VNVQRFKGLG EMNPLQLRET TMDPNTRRLV QLTIEDAEEM
MELMDMLLAK KRSGDRKTWL ESKGNMAEVV L
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