| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03654 |
|---|
| Symbol | |
|---|
| ID | 6777148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3940310 |
|---|
| End bp | 3941719 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642757107 |
|---|
| Product | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component |
|---|
| Protein accession | YP_002127940 |
|---|
| Protein GI | 196158451 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGGT TAAAAACAAC ATCACTACTT AAACGCTTGC GAAAGGCGAG TGCTGGCGTA
TGCGCTGCTC TCGCTGTCTC CGTAGCGAGC TTCTCCACTT CTGTTACCGC ACAGGAGCCA
GCGTTGGGCT GGCCTGAAAA AGAAGAGTTA AAGTTTGGCT TTATCAAGTT AACTGACATG
GCACCCCTAG CGGTAGCCTA CGAGAAAGGC TTTTTCGAAG AAGAAGGGCT TTACGTTACC
CTTGAAGCAC AAGCAAACTG GAAAGTGTTG CTAGATAGGG TTATTGATGG GCAGTTGGAC
GGAGCGCACA TGCTCGCGGG GCAACCGCTC GGTGCGACTA TCGGTTTTGG TACCGAGTCT
CACGTGGTTA CGGCCTTCAG TATGGATCTC AACGGTAACG GTATAACGGT ATCCAATGAG
GTTTGGGAAA AAATGAAAGC CCATATCCCT CAGGAAAATG GCAAACCAGT ACATCCTATT
AAAGCCGACT ACCTGAAACC TGTTGTTGAC GAATACCGCA ACGCCGGTAG GCCGTTTAAT
ATGGGTATGG TTTTTCCAGT TTCTACCCAT AACTATGAAC TTCGTTACTG GCTAGCCGCG
GGGGGTATTC ATCCGGGGTA CTACGCGCCA CACAAAGGTG ATACAGCGGG GCAAATAGAC
GCACAGGCAC TGCTTTCTGT AACCCCTCCT CCTCAAATGC CAGCAACCAT GGAAGCGGGC
ACGATTTACG GATATTGCGT AGGCGAGCCG TGGAACCAAC AGGCTGTATT TAAAGGCATT
GGTGTTCCCG TTATCACTGA CTACGAGATT TGGAAAAACA ACCCCGAGAA AGTGTTCGGC
GTTAGCCAAG GTTGGGCTGA AAAGTACCCC AATACGCATA TTCGCGTGGT TAAAGCCCTT
ATTCGAGCAG CAATGTGGCT TGATGAAAAC GACAATGCGA ATCGTCCTGA AGCGGTGAAA
ATTCTAGCGA AAAGTAACTA TGTAGGCGCG GATGAAGATG TCCTTGCCAA CAGCATGACC
GGAACGTTTG AGTACGAAAA AGGCGATAAA CGCGATGTGC CAGACTTCAA CGTATTCTTC
CGTTATAACG CAACCTACCC TTACTACAGC GATGCGATTT GGTACCTCAC GCAAATGCGT
CGCTGGGGGC AAATATCTGA AGCAAAGTCT GACGACTGGT ACAAAGAAAC CGCGAAGAAG
GTGTATAAGC CTGAAGTGTA TGCTCAGGCC GCTAAAGCAC TTATTGCAGA AGGAAAAGCG
AAGGCGTCAG ACTTCCCAGA GTTTTCGACA GAAACAGGTT ACAAGCCTGC ACAAAGCGAA
TTTATTGACG GCGTCACCTT TGATGGAAGC AAGCCAAATG CTTATTTAGA GCAATTTAAA
ATTGGCCTTA AAGGCAACAC AGTTCTTTAA
|
|---|
| Protein sequence | MTGLKTTSLL KRLRKASAGV CAALAVSVAS FSTSVTAQEP ALGWPEKEEL KFGFIKLTDM
APLAVAYEKG FFEEEGLYVT LEAQANWKVL LDRVIDGQLD GAHMLAGQPL GATIGFGTES
HVVTAFSMDL NGNGITVSNE VWEKMKAHIP QENGKPVHPI KADYLKPVVD EYRNAGRPFN
MGMVFPVSTH NYELRYWLAA GGIHPGYYAP HKGDTAGQID AQALLSVTPP PQMPATMEAG
TIYGYCVGEP WNQQAVFKGI GVPVITDYEI WKNNPEKVFG VSQGWAEKYP NTHIRVVKAL
IRAAMWLDEN DNANRPEAVK ILAKSNYVGA DEDVLANSMT GTFEYEKGDK RDVPDFNVFF
RYNATYPYYS DAIWYLTQMR RWGQISEAKS DDWYKETAKK VYKPEVYAQA AKALIAEGKA
KASDFPEFST ETGYKPAQSE FIDGVTFDGS KPNAYLEQFK IGLKGNTVL
|
|---|
| |