Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03579 |
Symbol | |
ID | 6778311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3865255 |
End bp | 3866364 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642757032 |
Product | tRNA (uracil-5-)-methyltransferase |
Protein accession | YP_002127865 |
Protein GI | 196158376 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0139639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAATT TTATGTCGGC CGATGAACAA CAACGTTATC AAGCGCAGTT AGACGAAAAA GTAGATCGTC TTTCGGCGTT ACTTTCTCCA TTTAATGCGC CTAAAACTTC GGTTTACCCA TCACAGCCTA CTCACTATCG TATGCGCGCA GAATTTAGGG TGTGGCACGA GGGCGACGAC CTCTTTCACA TCATGTTTGA TCAGGAAACA AAAGAAAAAT ATCGCGTAGA TAGTTTCCCT CCCGCGTGCA AAACAATTAA CGATGCGATG GAAAAGCTAC TAAACGAAAT TCGCCCTAAT GAAATACTAA GAAAGAAGTT GTTTCAGATA GATTACCTTT CAGCGCTATC TGGTGAACTC GTTATTAGCC TTTTATACCA TCGCCAGTTA GATGATGAAT GGGAAGCTGC CGCAAAGTCT CTTAAAAGTA CGTTGGAAAC GCACTTCCCG AAAGTGAATA TTATTGGCCG TGCAAGAAAA CAAAAACGCA TTATCGACAA CGATTTTGTT ATTGAGCGTT TGCCAGTAAA GGGTAATGAG TTCGTATTCA AGCATATCGA GAACAGCTTT ACTCAGCCTA ATGCTGAAGT AAATTGTAAG ATGATTGAAT GGGCTCTGGA CTGCGTTAAG CCTCTATCTG GTGATCTATT GGAAATGTAC TGCGGTGCCG GTAACTTCTC ATTACCGCTG GCCCTTCACT TCGATAACGT AGTGGGTACT GAAATAGCGA AACCCTCGGT ACAAGCAGCG CAGTTTAATA TTGAACAAAA CAGACTGCAC AATGTAAAAA TTGTCAGGTT AGCTGCAGAA GAATTTACGC AAGCTATGAA AGGAAAGCGT ACGTTTAGCC GATTAGAGGG TATCGATCTT AGCGAGTATA ACTTTACGAC TGTACTCGTC GATCCACCAA GAGCTGGGTT AGATGAAGAT TCATTAAGAA TGATTCAAGA TTACGACAAT ATTGTGTATA TCTCTTGTAA CCCTGAAACC TTAGCGCAAA ACCTTGAACT ATTGAGTGAA ACTCATGACG TCGCTCAATC GGCACTATTT GATCAATTTC CTTTCACCCA TCATATTGAG GCAGGTGTTT TACTTACACG CAAAGGCTAG
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Protein sequence | MENFMSADEQ QRYQAQLDEK VDRLSALLSP FNAPKTSVYP SQPTHYRMRA EFRVWHEGDD LFHIMFDQET KEKYRVDSFP PACKTINDAM EKLLNEIRPN EILRKKLFQI DYLSALSGEL VISLLYHRQL DDEWEAAAKS LKSTLETHFP KVNIIGRARK QKRIIDNDFV IERLPVKGNE FVFKHIENSF TQPNAEVNCK MIEWALDCVK PLSGDLLEMY CGAGNFSLPL ALHFDNVVGT EIAKPSVQAA QFNIEQNRLH NVKIVRLAAE EFTQAMKGKR TFSRLEGIDL SEYNFTTVLV DPPRAGLDED SLRMIQDYDN IVYISCNPET LAQNLELLSE THDVAQSALF DQFPFTHHIE AGVLLTRKG
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