Gene MADE_03573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03573 
Symbol 
ID6778136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3853629 
End bp3854615 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content46% 
IMG OID642757021 
Productputative BirA bifunctional protein 
Protein accessionYP_002127859 
Protein GI196158370 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.184427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAAG CATCAAAAGC TATAAGAAAA CATATACTCG CTTTGTTGTC TGACGGCCAT 
TTTCACTCAG GTGAAACCAT TGCTCAGCAG GTCGGTTTAT CAAGAACCGC GGTAGCGGGC 
CACATTTCCC AGCTTGCCGA TTGGGGGTTG GATGTATTTA AAGTGAAAGG TAAAGGCTAC 
CGATTAGAAC GAGGGTTCCC ATTGTTAAGT GCTGACAGTA TTAAACGACA TTTAGGCAAT 
ACAAAACGCG CGGTCATCGA TGTGGAGTCC GTATTGCCCT CTACCAATAC GGAAATGAAA 
AAACGTATTG CGAGTAAACG GGAAGATCTT GAAAACGGCG ATGTCGTCTT CGCCGAAATT 
CAAACCGATG GGCGCGGTCG CCACGGCCGT TCTTGGTTAG CCCCTGTTGG TGGTAGTCTA 
ACTTTCTCTA TGTACTGGTC TTTCCCTGAT GGTTACCAAA GCATGGCGGG TCTTTCTTTG 
CTAGTGGGGT TAGCCGTTTG CGATGCATTA AAAGAATTTG GTGTTGAAGA TGCCGAATTG 
AAATGGCCGA ACGATATTTA TCTACAAGGC AAAAAGCTTG CCGGTGTATT AATTGAAGTA 
GAAGGCCAGA TTGGCGCAAC GGCGCACAGT GTTATCGGTA TTGGTTTAAA TGTATGTGTA 
CCTGATAATC AGTATGATGT AGGGCAGCCT CATAGCGATC TAGCCTCTTA CCTAGGTACT 
ATTCCTGATA GAAACGCCTT AGCGGCAGAA ATAATTAAGT CGCTTTGGTC TTATTTACCG 
AAATTTACCC AGCAAGGGTT TGGTCCTTTC ACTGCGTATT GGGAAGCGTT AGACCTATAC 
GCCGATAAAC GTATTGTTTT GCAGATGGGC GAGAAGCGAT TTTCTGGAAT TGACAGGGGA 
GTGGACGCCA GCGGCGCACT ACTTGTTGAA ACACAAGACG GTATTACGCG ATTCCATGGT 
GGCGAAGTTA GCCTTAGAGG CAATTAA
 
Protein sequence
MRQASKAIRK HILALLSDGH FHSGETIAQQ VGLSRTAVAG HISQLADWGL DVFKVKGKGY 
RLERGFPLLS ADSIKRHLGN TKRAVIDVES VLPSTNTEMK KRIASKREDL ENGDVVFAEI 
QTDGRGRHGR SWLAPVGGSL TFSMYWSFPD GYQSMAGLSL LVGLAVCDAL KEFGVEDAEL 
KWPNDIYLQG KKLAGVLIEV EGQIGATAHS VIGIGLNVCV PDNQYDVGQP HSDLASYLGT 
IPDRNALAAE IIKSLWSYLP KFTQQGFGPF TAYWEALDLY ADKRIVLQMG EKRFSGIDRG 
VDASGALLVE TQDGITRFHG GEVSLRGN