Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03570 |
Symbol | |
ID | 6778196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3851093 |
End bp | 3852277 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642757018 |
Product | elongation factor Tu |
Protein accession | YP_002127856 |
Protein GI | 196158367 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000218481 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG AAAAGTTTGA ACGTACGAAA CCCCACGTAA ACGTGGGTAC AATCGGCCAC GTTGACCATG GTAAAACTAC GCTAACTGCA GCTATCACTA CAGTTCTATC TAAAACTTAC GGCGGTTCTG CTCAGGCGTT CGATCAAATC GATAACGCAC CTGAAGAGAA AGCGCGTGGT ATCACCATCT CTACTTCACA CGTAGAGTAC GATACTCCTA CTCGTCACTA CGCACACGTA GACTGCCCAG GACACGCTGA TTACGTTAAA AACATGATCA CTGGTGCTGC TCAGATGGAC GGTGGTATCC TAGTAGTAGC TGCGACTGAT GGCCCTATGC CACAGACTCG TGAGCACATC CTACTTGGTC GTCAGGTTGG TATCCCTTAC ATCATTGTAT TCATGAACAA GTGTGACATG GTTGATGATG AAGAGCTTCT AGAGCTAGTA GAAATGGAAG TTCGTGAACT TCTTAACGAA TACGAATTCC CAGGTGATGA CCTACCAGTT ATCCAAGGTT CAGCTCTTAA AGCGCTTGAA GGCGACGCAG AGTGGGAAAA GAAAATCATC GAGCTTGGTG AAGCGCTTGA TTCATACATC CCAGAGCCAG AGCGTGCAAT CGACAAGCCG TTCATCCTTC CAATTGAAGA CGTATTCTCA ATCTCAGGCC GTGGTACTGT TGTAACGGGT CGTGTTGAGC AAGGTATCAT CAAGGTTGGT GAAGAAGTAG AAATCGTAGG TATCAAAGAT ACGACTAAGA CTACTTGTAC TGGTGTTGAG ATGTTCCGTA AGCTTCTTGA CGAAGGCCGT GCAGGTGAGA ACGTTGGTGT TCTTCTACGT GGTACTAAGC GTGATGAAGT TGAACGTGGT CAAGTACTAG CTAAGCCTGG TTCAATCACT CCACACGTTA ACTTCGAAGC AGAAGTATAC GTACTGTCTA AAGATGAAGG TGGTCGTCAT ACTCCATTCT TCAAAGGCTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTAACTGGT GCTGTAGAGC TTCCAGAAGG CGTAGAAATG GTAATGCCTG GTGACAACCT TAAATTCAAA GTTGAGCTAA TTGCTCCGAT CGCGATGGAA GAAGGTCTTC GTTTCGCAAT CCGTGAAGGT GGTCGTACAG TAGGTGCTGG TGTTGTATCT AAGATCCTAG ACTAA
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Protein sequence | MAKEKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLSKTY GGSAQAFDQI DNAPEEKARG ITISTSHVEY DTPTRHYAHV DCPGHADYVK NMITGAAQMD GGILVVAATD GPMPQTREHI LLGRQVGIPY IIVFMNKCDM VDDEELLELV EMEVRELLNE YEFPGDDLPV IQGSALKALE GDAEWEKKII ELGEALDSYI PEPERAIDKP FILPIEDVFS ISGRGTVVTG RVEQGIIKVG EEVEIVGIKD TTKTTCTGVE MFRKLLDEGR AGENVGVLLR GTKRDEVERG QVLAKPGSIT PHVNFEAEVY VLSKDEGGRH TPFFKGYRPQ FYFRTTDVTG AVELPEGVEM VMPGDNLKFK VELIAPIAME EGLRFAIREG GRTVGAGVVS KILD
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