| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03519 |
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| Symbol | |
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| ID | 6777699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3798998 |
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| End bp | 3801187 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642756967 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_002127805 |
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| Protein GI | 196158316 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.822304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTCA TTCAAGTTGC TGTACCAGTG CCGCTGCGCC AACTTTTCAC ATATACCCAC
GATAGCGCAC TAGAAGCAGG CGTACGGGTA ATGGTGCCTT TCGGTCCGCG CAAACTTGTG
GGCGTAGTTG TTGAAACACT ACGAAAATCA GAGAGCGAAA TTGACAATAG CAACAAGCTA
AAAGCCATTG AAATGGTGCT AGATCATCAA CCTATTGTTG ATGGGGTGCT GCTAAAAATG
GCGCAATGGC TGTGGCAGTA CTACCACCAT GCTCCGGGTG AAGTGTTACA CGCCATGCTG
CCTGTATTAT TGCGAAAAGG CGAGTCGGCA GGCCCTACTC CACAAGATAT GCTCATGCTT
ACCGATGAGG GTAAAAAAAC GCTGTCAGCG TCGCTATCTC GCGCCCCAAA GCAAAACGCG
TGTTTTACCG CCTTGACCAA ACGGGCGATG CTCGCGATAG AGGCGCGTAA GCAGTTTGGT
GCGCCAGCGG TAAAAGCCTT GGTAGAAAAG TCGCTTGCTG TTATCAAAGA GGTTACTCCT
GAATTTAAGC CGGGCGCTTG GCTATCTACG TTAACAATGG CAGAAAAACC TGTTCCCGAT
ACTGAGCAGT CAGTTGCCAT CGCCGCCCTT AACCGTCAAC ACGGCAACTT TGCGGTTAGT
TTACTTGAAG GGGTGACCGG TAGCGGCAAA ACAGAAGTAT ACCTTCAAGC GATAGAGCCT
TTACTGCGCG AAGGAAAGCA GGTGCTTATC CTTGTGCCTG AAATTGGGCT TACCCCGCAA
ACTGTATCCC GCTTCGAAAA GCGCTTTGGC ATTGCCGTGG GCGTATTGCA TTCGCAACTT
TCAGACAAAG ACCGGCTGCA AGTATGGCAG CGAGCAAAAG CGGGCGAGCT CGGCATTGTT
ATAGGTACCC GCTCTGCTAT TTTCACCCCG CTTAATAACC CGGGTATGCT TATTGTTGAT
GAAGAGCACG ACGAGTCGTT TAAGCAGCAG GATGGGCTTC GCTATCATGC TCGCGATTTG
GCGGCCATGC GTGCGAAACA GCATAATATT CCTTTACTGC TTGGCAGTGC CACCCCTGCT
CTTGAAACCC TTAATAATGC GCTAAGCGGC CGCTATGCGC ACTTACAACT CACCAAGCGA
GCCGGGGGCG CGCAAAGTAC CCATCAGCAC GTATTAGATG CGCGCGACCA GCCAATTCAC
TACGGTATTT CACAAGGCCT GTTAACCATA ATGCGCCAGC ATATTAGCGC AGGGAATCAG
GTGTTGGTGT TTGTAAATCG CCGAGGCTAT GCGCCAGCGT TACTTTGTCA TCATTGCGGC
GAGACAGTAA CGTGTAAGCG TTGCGAGCGA CCTTACACCG TACACAAAGC GCAAAACCGA
TTGCAGTGCC ACCATTGCGG CGGCATGCGT GCTATGCCAA CAAACTGTGA AGCTTGCCAT
TACAACGAGC TAGTTACTGC GGGTACCGGT ACAGAGCAAG TAGAGCAGGG GCTTGCTAGC
TTGTTTCCCG GGGTAACGCA GGTGCGAATA GACAGCGATA CGGTGCGCGG TAAAGATAAG
TTACATCAAA CGCTCGATGC AATTAACCGC CAAGAATATC AGCTGCTTGT GGGCACCCAG
ATTTTGTCTA AAGGCCACCA CTTTCCTCAC GTTACATTAG TGGCGGTTCT CGATTGCGAT
GGCGCACTGT TTAGCGCAGA CTTCAGAGCC CCTGAAAAGC TTGCTCAACT GGTAACTCAA
CTTGCTGGAA GAGCGGGGCG TGCAAGTAAA CCCGGTGAAA TGTGGCTGCA AACCCATAAT
CCTCATCACC CGCTGCTACA AGATTTGGTG CATAATGGTT ACGGGCACTT TGCCAGGCAT
GCGTTAATGG AGCGAAAAGC GGCAAGCTTG CCCCCGTTTA TTAGTCAGTT CGTAATACGC
GCCGAAGCTA CTGATAGCAG TTTGGCTTAT CGATTTTTAC AAGACTGTAA GCAGGTATTT
ACGCAAGCGC ACGCCATTGA GATAAGCGGC CCGTTCCCAT GCCTAATTGA AAAGCGCCAA
GGCCGATTTC GATTCATGCT GGTGTGTAGT CATCAAAAAC GCGCCCCGCT TCATAATGCG
CTGCGTTTGG CGCTTCCGTT TTTACAGGCT TTACCGCAGG CCACTAAGGT AAGGTGGTCA
ATCGATATCG ATCCTACCGA TTTCAGTTAG
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| Protein sequence | MAFIQVAVPV PLRQLFTYTH DSALEAGVRV MVPFGPRKLV GVVVETLRKS ESEIDNSNKL
KAIEMVLDHQ PIVDGVLLKM AQWLWQYYHH APGEVLHAML PVLLRKGESA GPTPQDMLML
TDEGKKTLSA SLSRAPKQNA CFTALTKRAM LAIEARKQFG APAVKALVEK SLAVIKEVTP
EFKPGAWLST LTMAEKPVPD TEQSVAIAAL NRQHGNFAVS LLEGVTGSGK TEVYLQAIEP
LLREGKQVLI LVPEIGLTPQ TVSRFEKRFG IAVGVLHSQL SDKDRLQVWQ RAKAGELGIV
IGTRSAIFTP LNNPGMLIVD EEHDESFKQQ DGLRYHARDL AAMRAKQHNI PLLLGSATPA
LETLNNALSG RYAHLQLTKR AGGAQSTHQH VLDARDQPIH YGISQGLLTI MRQHISAGNQ
VLVFVNRRGY APALLCHHCG ETVTCKRCER PYTVHKAQNR LQCHHCGGMR AMPTNCEACH
YNELVTAGTG TEQVEQGLAS LFPGVTQVRI DSDTVRGKDK LHQTLDAINR QEYQLLVGTQ
ILSKGHHFPH VTLVAVLDCD GALFSADFRA PEKLAQLVTQ LAGRAGRASK PGEMWLQTHN
PHHPLLQDLV HNGYGHFARH ALMERKAASL PPFISQFVIR AEATDSSLAY RFLQDCKQVF
TQAHAIEISG PFPCLIEKRQ GRFRFMLVCS HQKRAPLHNA LRLALPFLQA LPQATKVRWS
IDIDPTDFS
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