| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03516 |
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| Symbol | hslU |
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| ID | 6777697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3796024 |
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| End bp | 3797352 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642756964 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_002127802 |
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| Protein GI | 196158313 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.63794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA TGACACCAAG AGAAATTGTT CACGAGTTAG ACCGTCATAT TATCGGTCAA
CAAGATGCCA AGCGTGCTGT ATCGATTGCA CTTAGAAACC GCTGGCGTCG CATGCAGCTT
GAGCCTGAGC TGCGCCAAGA AGTTACGCCA AAAAATATTT TAATGATTGG TCCAACGGGT
GTGGGTAAAA CAGAAATTGC CCGTCGTTTG GCAAAACTTG CCAATGCGCC ATTTATCAAA
GTAGAAGCAA CAAAGTTCAC CGAAGTGGGC TATGTAGGTA AAGAAGTTGA GACGATCATT
CGTGATCTTG CCGATATCGC GGTTAAGATG ACGAAAGAAA ACGAAATGAA AAAAGTGAAA
TTCCGCGCGG AAGAAGCGGC GGAAGAGCGC ATTTTAGACG TATTGCTGCC ACCACCAGAA
GATGCGTGGG GTAACAAAGA AGACGTTGAA GATCGCGGCA CACGCCAAGC GTTTCGCAAG
AAGCTGCGCC AGGGTGACCT CGATGACAAA GAAATTGAAA TTGATGTGGC GCTTCCACAA
GTTGGCGTAG AAATTATGGC GCCTCCCGGC ATGGAAGAAA TGACCAATCA GCTTCAAGGC
ATGTTCCAGA ACTTGTCGGG TTCGCAGAAG AAAAAGAAAA AGCTGAAAAT TAAAGAAGCC
CTTAAACTGC TTATTGAAGA AGAAGCGGCG CGCCTTGTTA ATCAAGAAGA TTTGAAAGAA
AAAGCGATTG AGTCGGTAGA ACAGCACGGC ATTGTATTCG TCGATGAAAT TGACAAAATC
TGTAAGCGCG AAGGCAATAA CTCAGGTGAT GTGTCTCGCG AAGGCGTTCA GCGCGATCTG
CTTCCACTTG TAGAAGGTTC AACGGTATCA ACGAAACACG GCATGGTAAA AACAGACCAT
ATCCTGTTTA TCGCTTCTGG CGCGTTTCAA ATGAGTAAGC CATCGGATCT TATTCCAGAG
CTTCAAGGGC GCTTGCCTAT TCGCGTTGAG TTATCAGCGC TTAAAGTGGG CGATTTCAAA
CGAATTCTTA CCGAACCTAA TGCGTCGCTA ACGCAGCAAT ATATTGCGCT AATGAAAACC
GAAGGCGTTG ATATTCGCTT TGATGATTCG GGTATTCAGC GCATTGCCGA AGCGGCATGG
CAAGTCAACG AGCGCACTGA AAACATTGGT GCTCGACGCC TGCACACCGT ATTAGAGCGT
CTTATGGAAG ATATCTCTTT TGACGCTTCA GAAAAAAGCG GTGAGTCGTT TGTAATTGAT
GCCGACTACG TGAATAACCA CTTAGAAACC TTGGTAGATA ACGAAGACTT ATCGCGCTTT
ATTCTTTAA
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| Protein sequence | MSEMTPREIV HELDRHIIGQ QDAKRAVSIA LRNRWRRMQL EPELRQEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVETII RDLADIAVKM TKENEMKKVK
FRAEEAAEER ILDVLLPPPE DAWGNKEDVE DRGTRQAFRK KLRQGDLDDK EIEIDVALPQ
VGVEIMAPPG MEEMTNQLQG MFQNLSGSQK KKKKLKIKEA LKLLIEEEAA RLVNQEDLKE
KAIESVEQHG IVFVDEIDKI CKREGNNSGD VSREGVQRDL LPLVEGSTVS TKHGMVKTDH
ILFIASGAFQ MSKPSDLIPE LQGRLPIRVE LSALKVGDFK RILTEPNASL TQQYIALMKT
EGVDIRFDDS GIQRIAEAAW QVNERTENIG ARRLHTVLER LMEDISFDAS EKSGESFVID
ADYVNNHLET LVDNEDLSRF IL
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