Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03453 |
Symbol | |
ID | 6778761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3725106 |
End bp | 3726131 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642756901 |
Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
Protein accession | YP_002127739 |
Protein GI | 196158250 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0486412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATTT TAGGAATAGA AACATCTTGT GACGAAACCG GCATCGCTGT CTATGACGAT GAGAAAGGTT TGTTGTCCCA CGAATTATAT AGCCAAGTGA AGCTACACGC CGATTATGGT GGTGTAGTGC CAGAACTTGC GTCGCGGGAT CACGTAAGAA AAATTATTCC TTTGATAGAA AAAGCCATGG AAGATGCCAA CACGCAACCA TCAGACATCG ACGGCGTTGC TTTTACGCAA GGCCCAGGTC TGGTAGGCGC ATTATTGGTC GGTTCATCAG TGGGTCGTTC ATTGGCCTAT GCGTGGAACG TACCTGCGGT AGGTGTTCAC CATATGGAAG GGCATTTATT AGCGCCTATG CTCGAAGACG ACGCACCGGC ATTTCCTTTT ATTGCGCTTT TAGTATCCGG CGGCCACTCG ATGCTGGTTA AAGTAGAAGG TATTGGTCAA TACGAAGTGC TTGGGGAATC TATAGATGAT GCGGCGGGCG AAGCCTTTGA CAAAACCGCT AAACTCCTTG GCTTAGATTA CCCAGGCGGG CCGCTTTTGG CGAAGCTGGC TGAAAAAGGC GAAGCAGGGC ATTACAAGTT CCCTCGCCCT ATGACAGACA GACCTGGTCT TGATTTTAGC TTCAGTGGCT TAAAGACCTT TGCGGCTAAT ACTATCCGCG ACGCTGATTT AACAGGCGAT AATGCAGAGC AAATTAAAGC CAACATTGCT TATGCGTTTC AAGAGGCAGT GGTTGATACA CTGATAATAA AGTGCAAGCG GGCGTTAAAA CAAACGGGAA TGAAGCGCCT TGTTATAGCA GGCGGCGTAA GTGCGAACAC CATGCTACGC AGTGAGATGA AAGCGCTAAT GCAAGCGCTA AAAGGTGAAG TGTTTTATCC TAGCTTGGCG TATTGTACTG ACAATGGAGC CATGATTGCT TATGCCGGCA TGCAGCGATT AAAAGCAGGG GAAACCTTAG CGCTTTCCTC TCAAGCAAAG CCGCGCTGGC CTCTTGACAC CTTATCGGCA ATTTAA
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Protein sequence | MRILGIETSC DETGIAVYDD EKGLLSHELY SQVKLHADYG GVVPELASRD HVRKIIPLIE KAMEDANTQP SDIDGVAFTQ GPGLVGALLV GSSVGRSLAY AWNVPAVGVH HMEGHLLAPM LEDDAPAFPF IALLVSGGHS MLVKVEGIGQ YEVLGESIDD AAGEAFDKTA KLLGLDYPGG PLLAKLAEKG EAGHYKFPRP MTDRPGLDFS FSGLKTFAAN TIRDADLTGD NAEQIKANIA YAFQEAVVDT LIIKCKRALK QTGMKRLVIA GGVSANTMLR SEMKALMQAL KGEVFYPSLA YCTDNGAMIA YAGMQRLKAG ETLALSSQAK PRWPLDTLSA I
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