Gene MADE_03443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03443 
Symbol 
ID6776830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3715560 
End bp3716186 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content45% 
IMG OID642756891 
Producttranscriptional regulator, HTH_3 family protein 
Protein accessionYP_002127729 
Protein GI196158240 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGCGTTA TAGCGCACAA CTGCTTTATC AACATTAGAG ACGAAGTAAA AGGCCTTCAT 
TACATGACAA AAGCAAATGC GCAGCCTTCT GCTATTTCAA AAAGCATTGC TCAACACCTG 
CAATCAGTTC GTACAGGGCG AGGCCTTTCA CTTGATAAAA CCGCCAAATT AACAGGGGTG 
TCCAAAGCCA TGCTTGGGCA AATAGAGCGA GGTGAGTCTA GCCCAACTAT CGCGACTCTG 
TGGAAAATAG CCACAGGTCT TGCGTGTTCT TTTTCTTCTT TCTTGTCTGG TGACGAAACA 
GCGCCTACGT CTCAACACGC AGATGATAAG TTCGCTAACG ACCCAAACGT AACCATTAAA 
ACGCTATTCC CGTTTAATGC AGTCACTCAG TTTGAAATGT TTGAGCTTTG CTTGAAGGAC 
TTTCATGAGC AGCACTCTTC GGCGCACCAA ATAGGTGTAA CAGAACACAT TCACGTATTA 
CAAGGGAAGT TAGGGGTTTT GCAAGATGGT CAATGGCAAG CCTATCAAGC GCAAGAGCAA 
TGTATATTGC ACGCAGATCA GCCACACGGT TATCGAGATG AAGTAGGAGA AACGCGCTTT 
GTTGTGGTAA TTCACTACCC TGTTTAA
 
Protein sequence
MCVIAHNCFI NIRDEVKGLH YMTKANAQPS AISKSIAQHL QSVRTGRGLS LDKTAKLTGV 
SKAMLGQIER GESSPTIATL WKIATGLACS FSSFLSGDET APTSQHADDK FANDPNVTIK 
TLFPFNAVTQ FEMFELCLKD FHEQHSSAHQ IGVTEHIHVL QGKLGVLQDG QWQAYQAQEQ 
CILHADQPHG YRDEVGETRF VVVIHYPV