| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03370 |
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| Symbol | prpB |
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| ID | 6777261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3625050 |
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| End bp | 3625925 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642756818 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_002127656 |
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| Protein GI | 196158167 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAG GAAAGAAATT CAGAACCGCG TTAGAGAATA ACAAACCTCT TCAAATCGTA
GGCACTATTA ATGCCTACAC GGCCATGATG GCGAAGACCA TTGGTCATCA AGCTATTTAC
CTTTCAGGTG GCGGCGTAGC TAACGCCTCG TATGGCTTGC CAGATTTAGG CATGACCTCG
CTCAATGACG TGATTGCTGA TGTTCAGCGT ATTACCAGTG CGTGTGACCT ACCGCTTATG
GTGGATATCG ACACAGGCTG GGGCGGTGCA TTTAACATTG CCAAAACCAT TCGCGATATG
GAAAAAGCCG GCGCGGCCGC GGTACATATG GAAGACCAAG TCGCACAAAA GCGCTGTGGT
CACCGCCCTA ATAAAGAAAT TGTGAGTACA GCGGAAATGG TAGATCGCAT TAAAGCTGCC
GTTGATGCCA GAACCGACCC TGACTTTTTC ATTATGGCGC GCACCGACGC ATTCGCGCAA
GAAGGCTTAG AAAAAGCCAT TGAACGCGCA AAAGCCTACG TTGAAGCGGG CGCAGACGGT
ATTTTTGCAG AAGCAGTGCA GACCGAAGAA CACTATCGCG CATTTGCAGA AGCACTAGAC
GTTCCTATTC TTGCCAATAT CACTGAGTTC GGCAAAACCG AACTATGGAA CAAAGAAGAA
CTTGGTGAAT GGGGTGCTGA TATGGTGCTT TACCCGCTAA GTGCGTTCCG CGCCATGAAT
AAAGCAGCAG AAATGGTGTA CAAATCTATA CTTGAAAATG GCGATCAAAA GGCTGTCGTC
GACACCATGC AAACACGCAT GGAGCTATAC GATTACCTTG GCTACCACGA ATACGAGCAA
AAGCTAGATG CGCTATTTGC CGACGGCAAA AACTAA
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| Protein sequence | MSAGKKFRTA LENNKPLQIV GTINAYTAMM AKTIGHQAIY LSGGGVANAS YGLPDLGMTS
LNDVIADVQR ITSACDLPLM VDIDTGWGGA FNIAKTIRDM EKAGAAAVHM EDQVAQKRCG
HRPNKEIVST AEMVDRIKAA VDARTDPDFF IMARTDAFAQ EGLEKAIERA KAYVEAGADG
IFAEAVQTEE HYRAFAEALD VPILANITEF GKTELWNKEE LGEWGADMVL YPLSAFRAMN
KAAEMVYKSI LENGDQKAVV DTMQTRMELY DYLGYHEYEQ KLDALFADGK N
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