Gene MADE_03365 details

Gene Information

• Locus tag: MADE_03365
• ID: 6777190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 3619842
• End bp: 3620459
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 642756813
• Product: DNA-binding response regulator, LuxR family protein
• Protein accession: YP_002127651
• Protein GI: 196158162
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCAA AAGTCACTAC TATTTTGATT GTTGAAGATC AGTCTTTGGT TCGCGATGCC 
ATAGCCATGC TTTTGTCATT AGAAGACGAC CTAACTGTTG TCGATAAGTA CAGCAATGGA 
CAAGAAGCGA TTAATTACTT AAATGAACAC CCTGCGCCCG ATATCATTTT AAGCGATATA 
GAAATGCCGC TGGTATCTGG ACTAGATTTA GCGGCTCATA TCGCCAATGG AAGCCTCAGT 
ACCAAGATGG TCCTTATGAC CACGTTTTCA AAACCAGGTT ATATCAAGCG GGCGTTAAGT 
TTAGGGGTTA AAGGGTTTAT TTTAAAAGAA TCGGATAGCG ACTATCTAAT AAAGGCAATT 
CACGATGTAT CTGCCGGAAA AAAGGTAATT TCCACCGAGC TTGCGATCAT GGCATTAGAT 
GACAACAACC CGCTGTCAAA AAAAGAAATG TCGGCTCTTA AGCTGGCATC AGAAGGGCTG 
AAAACTCAAG ATATAGCCCG GTCGCTGTTT TTATCTGAAG GAACCGTAAG AAACTACTTG 
TCAGAAGCGA TATCTAAGCT AGACGCCACA AACCGAGTAG ACGCTGCCCG CATAGCGAAA 
CAAAAAGGCT GGCTCTAA 

 

Protein sequence

MNSKVTTILI VEDQSLVRDA IAMLLSLEDD LTVVDKYSNG QEAINYLNEH PAPDIILSDI 
EMPLVSGLDL AAHIANGSLS TKMVLMTTFS KPGYIKRALS LGVKGFILKE SDSDYLIKAI 
HDVSAGKKVI STELAIMALD DNNPLSKKEM SALKLASEGL KTQDIARSLF LSEGTVRNYL 
SEAISKLDAT NRVDAARIAK QKGWL