Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03339 |
Symbol | |
ID | 6778661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3597853 |
End bp | 3598533 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642756787 |
Product | Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
Protein accession | YP_002127625 |
Protein GI | 196158136 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGTGC TACTTGTAGA AGATGATCCT AAAGTTGCCT CGCACATTGC AAATGGACTA TTGGGTGAAG GGCATGAATG TATTACCGTT GGTGACGGCG CATCAGGCTT CAACGAAGCC TCAAGTAATG AGTTAGATGC GGTAATTTTA GACGTAATGC TGCCGGAACT TGACGGTTTT TCTGTCTTGG AAAAACTACG AGAGGAAGGT AACACCACAC CCGTTCTGCT ATTAAGTGCC AAGAGCCAAG TTGAAGACAA GGTAAAAGGT CTACGCACAG GCGCAAACGA CTACCTGACC AAACCTTTCG CCTTCGAGGA ATTGTTGGCG CGTGTTGAAG GTTTAGCTGG TCGCAACAAA GACGGTGAAG ATAAAACCCT CATCAAAGTC GGCGATCTCA CCCTCGATTT AGTAAATCGC AAAGTGTTGC GAGGCGATCA AGAAATTGAT CTTCAATCGA AAGAGTTTCA GCTTTTAGAG TGTTTGCTTC GTCACAAGGG TAAGGTTGTT ACCCGGAGCA TGCTGCTAGA GCAAGTTTGG AATTATCATT TCGATCCGCA AACCAATGTT ATCGACGTGC ATATTAGCCG CTTGCGACAA AAAGTTGATA AAGCGTTTAA TGTTCCGCTT ATTGAAACCG TTCGCGGTAC CGGTTATCGC ATAGCGGATG GGCTTGCATG A
|
Protein sequence | MKVLLVEDDP KVASHIANGL LGEGHECITV GDGASGFNEA SSNELDAVIL DVMLPELDGF SVLEKLREEG NTTPVLLLSA KSQVEDKVKG LRTGANDYLT KPFAFEELLA RVEGLAGRNK DGEDKTLIKV GDLTLDLVNR KVLRGDQEID LQSKEFQLLE CLLRHKGKVV TRSMLLEQVW NYHFDPQTNV IDVHISRLRQ KVDKAFNVPL IETVRGTGYR IADGLA
|
| |