Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03326 |
Symbol | |
ID | 6777122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3581149 |
End bp | 3582432 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642756774 |
Product | threonine synthase |
Protein accession | YP_002127612 |
Protein GI | 196158123 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0498] Threonine synthase |
TIGRFAM ID | [TIGR00260] threonine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATTGG TAAATTTAAA AGATTCATCG GACACAGCGA GCTTTGCTGA AGCGGTAAAG CGTGGTTTAG GTAAGAACCA AGGGCTTTAT TTTCCAGAGC ATATTCCTAC CTTAGACAAT ATTGACGAAT TGCTGGAAAA GCCATTTGTA GAGCGCAGCA TTGATGTGCT TCGTGCGCTT ATTGGAGACG AGCTTAATAA CGGCGAGCTT GAAGAAATTG TCAAAACAGC TTTCGCATTT GGTGCGCCGG TTGAACAGGT TAACGATAAC GTTTATAGCC TAGAGCTTTT CCACGGCCCA ACCCTTGCGT TTAAAGACTT TGGTGGCCGT TTTATGGCAC AAACGCTCTC GCGTATAAGC GAAGGTAAGC CTGTGACTAT CCTAACCGCC ACGTCAGGCG ATACAGGTGC AGCTGTTGCT CATGCGTTCC ACGGTATCGA CAATATCAAC GTGGTTATCT TGTTCCCTAA GGGCAAGATC AGCGCGTTGC AAGAAAAGCT TTTCACTACG TTGGGCGGTA ATATTCACAC TGTAGCAATC GAATCAGATT TTGATGCATG CCAGTCCCTT GTGAAAACTG CGTTTGACGA CCCAGATGTG CGTGAAGGTC TTCACCTCAA CTCTGCGAAC TCCATTAATA TAAGTCGTTT ACTGGCACAG GTATGTTACT ACTTTGAAGC GGTTAGCCAA CTGCCCAAAG AGAAGCGCGA CCAGCTTGTT ATTTCGGTAC CTAGCGGTAA CTTCGGTAAT CTTACGGCAG GCATGATCGC TAAATCGTTA GGCCTACCGA TTAAACGCTT CATTGCCGCA ACTAACTTAA ACGATACCGT GCCTCGTTAC TTAAAAACGG GGGAGTGGGA CCCGAAAGCG ACGGTTGCCA CTATGTCGAA CGCAATGGAT GTTAGCCAGC CGAACAACTG GCCGCGTATT GAAGCGTTAA TTGAGCGTGG TTACATCGAC AAAGCGTGCC TTAAGGGTGA AATGGTTGAT GAAGAATATA CTCAGCTTGC CATGCGCCAG CTAGCGCAGC AAGGCTACAC CAGTGAGCCA CACGCTGCTA TTGCCTATCG CGCGGTAAGC CACGACCTGC AAGACGGTGA AATTGGCCTG TTTTTAGGTA CTGCTCACCC AGCTAAGTTC AGAGAAACGG TAGAAAACGT ATTGGGTAAC CCAATAAGCT TGCCAAAGCC GTTAGCAGAC GTAGCGGGCG AAGACAGCCT AGCGGTAGAC TTACCTGCGT CCTATGATGC GCTTAAGCAG CACATGATGA ACTTGCTTAA GTAA
|
Protein sequence | MELVNLKDSS DTASFAEAVK RGLGKNQGLY FPEHIPTLDN IDELLEKPFV ERSIDVLRAL IGDELNNGEL EEIVKTAFAF GAPVEQVNDN VYSLELFHGP TLAFKDFGGR FMAQTLSRIS EGKPVTILTA TSGDTGAAVA HAFHGIDNIN VVILFPKGKI SALQEKLFTT LGGNIHTVAI ESDFDACQSL VKTAFDDPDV REGLHLNSAN SINISRLLAQ VCYYFEAVSQ LPKEKRDQLV ISVPSGNFGN LTAGMIAKSL GLPIKRFIAA TNLNDTVPRY LKTGEWDPKA TVATMSNAMD VSQPNNWPRI EALIERGYID KACLKGEMVD EEYTQLAMRQ LAQQGYTSEP HAAIAYRAVS HDLQDGEIGL FLGTAHPAKF RETVENVLGN PISLPKPLAD VAGEDSLAVD LPASYDALKQ HMMNLLK
|
| |