Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03325 |
Symbol | |
ID | 6778637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3580484 |
End bp | 3581149 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642756773 |
Product | uracil-DNA glycosylase |
Protein accession | YP_002127611 |
Protein GI | 196158122 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.100053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCAC TAACATGGCA AAGCGCGCTA GGTAACGAGA AACAAAAAGA GTACTTTGTT GAGTTACTTG AGCGCGTAAA GCAAGCGCGT GAAGCGGGTA GTGTTATTTA CCCGCCTCAG CCTGATGTAT TCAATGCGCT AAAATACACG CCGCTCGATA AAGTTAATGT GGTGATACTA GGGCAAGATC CTTATCACGG CCCTAATCAA GCCCACGGCC TTTGTTTTTC TGTTCAAGCA GGTGTGAAAA CGCCGCCGTC GCTTAAAAAC ATGTACAAGG AACTATTGAC CGATATCGAC GGCTTTGTCG AGCCTAATCA CGGTACGCTG ACGCCATGGG CAGAGCAAGG TGTGTTGTTA CTTAATACCG TACTTACCGT AGAGCAGGGC AAGGCACACA GCCATGCGAA GTGGGGGTGG GAAACCTTCA CCGACAAAGT TATCGATGTG GTAAATGCGA ACTGCGAGAA CGTGGTATTT CTTTTGTGGG GCAGTCATGC GCAAAAGAAG GGTAAGCATA TAGACCGCGA AAAACACAAA GTGTTACACG CACCGCACCC TTCGCCGCTT TCAGCCCATA GAGGCTTTCT AGGGTGTAAG CATTTTAGCC AAACCAACGA ATACCTTGTT GAGAAAGGCA AAACCCCAAT CAACTGGCAG GTGTAA
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Protein sequence | MTSLTWQSAL GNEKQKEYFV ELLERVKQAR EAGSVIYPPQ PDVFNALKYT PLDKVNVVIL GQDPYHGPNQ AHGLCFSVQA GVKTPPSLKN MYKELLTDID GFVEPNHGTL TPWAEQGVLL LNTVLTVEQG KAHSHAKWGW ETFTDKVIDV VNANCENVVF LLWGSHAQKK GKHIDREKHK VLHAPHPSPL SAHRGFLGCK HFSQTNEYLV EKGKTPINWQ V
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