Gene MADE_03312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03312 
Symbol 
ID6778598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3571893 
End bp3572615 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content46% 
IMG OID642756760 
Productputative amino acid transporter 
Protein accessionYP_002127598 
Protein GI196158109 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGG TTTCATCAAA AAGTGGGCTA AAGCAGGGGA TCATAGATGG GTTACCCTTG 
CTCGGAGGGT ATATCCCGGT AGCCATTTCA TTCGGCGTTA TTGCCATTCA AGCTGGCTTT
TCAACATTAG AGGCTACGCT AATTTCTGTG TTCATTTACG CAGGTGCGTC GCAATTTCTT
TTAGTTGCCA TGGTGGCATC AGGTGCTCCC CTTTGGCTAG CCGTGTGTAT GACACTATTG
GTCAACGTAC GCCATGTGGT TTACGCGCCC AACTTAGTGC CTTATTTACC GCAAAGCAAA
GCGTGGCCCT ATTTAATGCA TGGCCTTACT GATCAAATTT TTGCGCTAGC CCATACACGT
TTACCTTCTA TGGAAGACAC CAAGAAAGTA GATTGGTTTA AAGGTGTATC AATGGTGGCG
TGGTTTAGTT GGATTCTGGG TACAGCACTT GGAGGTATAG CGGGAGACTC GCTTACACAG
AAATGGCCAA TTCTTGATAG CGTGATGCCC TTTGCCTTAC CGGCGTTGTT TGTTGTGTTA
TTAGCGCCAA AATTTTCTAA TAAACTGTGG AGCGTTACCT TGCTGGTAAC GATATCCATA
GCGCTTTTTG TTGCGCTTAG TAGTTTTAAA AATGCAGCTA TTCCGCTGGC GGCGCTATGC
GGTGCGCTCA CGTTCTATTT GCTTACTTCC CATGTTGAAA GGACGCAGTC TCATGCAAAC
TGA
 
Protein sequence
MSQVSSKSGL KQGIIDGLPL LGGYIPVAIS FGVIAIQAGF STLEATLISV FIYAGASQFL 
LVAMVASGAP LWLAVCMTLL VNVRHVVYAP NLVPYLPQSK AWPYLMHGLT DQIFALAHTR
LPSMEDTKKV DWFKGVSMVA WFSWILGTAL GGIAGDSLTQ KWPILDSVMP FALPALFVVL
LAPKFSNKLW SVTLLVTISI ALFVALSSFK NAAIPLAALC GALTFYLLTS HVERTQSHAN