Gene MADE_03300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03300 
Symbol 
ID6778585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3562145 
End bp3562681 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content44% 
IMG OID642756748 
Producthypothetical protein 
Protein accessionYP_002127586 
Protein GI196158097 
COG category[S] Function unknown 
COG ID[COG0762] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAA CGGTATTTTT GGTTGATACC TTATTCAACC TTTATTTGAT GGTGGTTATT 
CTGCGCCTTT GGTTACAAAT GGTACAGGCA GACTTTTATA ACCCGCTGAG TCAATTTGTA
GTAAAAGCAA CCCACCCTAT TGTGGGGCCG TTGCGCCGCA TCATTCCTTC AATCGGCAGG
TTTGACACTG CCACCTTTGT ACTTGCCGTA GCTGTTTGCG CGTTAAAATT AGTTACGCTC
GGGCTTATGT TTGGTGGTAG TCTTAACCCC ATCGGCATTG CTATTTTGTC GGTCATTGGC
GTAGTGAAAG AAACCTTGTC TCTGATGTTT TGGGTTTTGC TATTACGCGC CATTTTAAGC
TGGGTTTCAC AAGGCCAGTC GCCTGTGGAC TATGTGCTTT ATCAACTTAC TGAGCCTTTT
TTAGCTCCTA TTCGAAAAAT CATCCCACCT CTTGGCGGGT TAGATTTATC AGTGCTCATT
GCCATTATCG CATTACAGTT TTTACAGCTT CTGATCCAAG ACACCTTCCC CATGTAA
 
Protein sequence
MNATVFLVDT LFNLYLMVVI LRLWLQMVQA DFYNPLSQFV VKATHPIVGP LRRIIPSIGR 
FDTATFVLAV AVCALKLVTL GLMFGGSLNP IGIAILSVIG VVKETLSLMF WVLLLRAILS
WVSQGQSPVD YVLYQLTEPF LAPIRKIIPP LGGLDLSVLI AIIALQFLQL LIQDTFPM