Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03300 |
Symbol | |
ID | 6778585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3562145 |
End bp | 3562681 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642756748 |
Product | hypothetical protein |
Protein accession | YP_002127586 |
Protein GI | 196158097 |
COG category | [S] Function unknown |
COG ID | [COG0762] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAA CGGTATTTTT GGTTGATACC TTATTCAACC TTTATTTGAT GGTGGTTATT CTGCGCCTTT GGTTACAAAT GGTACAGGCA GACTTTTATA ACCCGCTGAG TCAATTTGTA GTAAAAGCAA CCCACCCTAT TGTGGGGCCG TTGCGCCGCA TCATTCCTTC AATCGGCAGG TTTGACACTG CCACCTTTGT ACTTGCCGTA GCTGTTTGCG CGTTAAAATT AGTTACGCTC GGGCTTATGT TTGGTGGTAG TCTTAACCCC ATCGGCATTG CTATTTTGTC GGTCATTGGC GTAGTGAAAG AAACCTTGTC TCTGATGTTT TGGGTTTTGC TATTACGCGC CATTTTAAGC TGGGTTTCAC AAGGCCAGTC GCCTGTGGAC TATGTGCTTT ATCAACTTAC TGAGCCTTTT TTAGCTCCTA TTCGAAAAAT CATCCCACCT CTTGGCGGGT TAGATTTATC AGTGCTCATT GCCATTATCG CATTACAGTT TTTACAGCTT CTGATCCAAG ACACCTTCCC CATGTAA
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Protein sequence | MNATVFLVDT LFNLYLMVVI LRLWLQMVQA DFYNPLSQFV VKATHPIVGP LRRIIPSIGR FDTATFVLAV AVCALKLVTL GLMFGGSLNP IGIAILSVIG VVKETLSLMF WVLLLRAILS WVSQGQSPVD YVLYQLTEPF LAPIRKIIPP LGGLDLSVLI AIIALQFLQL LIQDTFPM
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