Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03291 |
Symbol | |
ID | 6778571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3554919 |
End bp | 3555647 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756739 |
Product | hypothetical protein |
Protein accession | YP_002127577 |
Protein GI | 196158088 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATAC CTAGAGTTTA TTACCCCAAT CCTATTCCGT TAGAGCAAGA ATTCGAGTTA ACCGAAGATG CAGGGCATCA CATTGCTACC GTACTGCGCA TAAAGCCCAA TCGTCCCATT GTACTTTTTA ACGGCGACGG CAATGAATAC AGCGCACAAG TTATCAGTGT TCAAAGAAAG AAAGTAATCG TAGAAGCCGA TGCTTGCCTT TCCCTAGCTA AAGAATCTCC TCTTCACCTA CATCTCGGCC AAGGTGTATC TAAAGGCGAC AGGATGGATA CGGTTCTTCA GAAAAGCGTT GAGCTTGGTG TGTCAGAGAT AACACCAGTG ATTACCGAAC GCTGCACCGT GAAGCTCGAT GAGTCTCGCT GGGAAAAGAA AATCCAGCAA TGGCAGAAGA TTGTTATCGG AGCTTGTGAG CAAAGTGGGC GTAATATTAT CCCTAAGCTA AACGCGCCGG TGAGCCTAAA CACTTGGCTA TCATCTTCAA CCAATACCAC ACGACTGGTG CTTGCACCAG GCGCTGAACA GCCGCTAGCA AGACAGCCAT ACAACGCACA GGGGTTTCGT TTATTAATTG GTCCAGAAGG CGGGTTATCA GACACGGAAA TACATCAAGC CAACGAAAAT GGGTACCAAT CTGTTAGTTT GGGACCGCGT ATTTTGCGAA CTGAAACCGC GGCCATAACA AGTTTAAGCA TACTTCAAGC GCAGCACGGC GATTTTTAG
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Protein sequence | MRIPRVYYPN PIPLEQEFEL TEDAGHHIAT VLRIKPNRPI VLFNGDGNEY SAQVISVQRK KVIVEADACL SLAKESPLHL HLGQGVSKGD RMDTVLQKSV ELGVSEITPV ITERCTVKLD ESRWEKKIQQ WQKIVIGACE QSGRNIIPKL NAPVSLNTWL SSSTNTTRLV LAPGAEQPLA RQPYNAQGFR LLIGPEGGLS DTEIHQANEN GYQSVSLGPR ILRTETAAIT SLSILQAQHG DF
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