Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03278 |
Symbol | |
ID | 6776706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3538543 |
End bp | 3539583 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642756726 |
Product | phospholipase/Carboxylesterase |
Protein accession | YP_002127564 |
Protein GI | 196158075 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.235294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGTCGT TGAAGTCTTT TGTAAAAATG CTTGCGTGTT GTATTGCGCT AGCTAGTGCC AATAATGCGC TGGCCCAAAA TAATGAAATA AAAGAGTCGC AGGCGCAGTT TAAAGCTTTT TACGAGAAAG AGTGGGGGCA AACCCAGCCT TGTAGGGAAA CCGCGCTTAA CCGTTTTTCT GTGTGTAGCA ATGTGTTGCG CAATGAAGGC AACGGGCCTT TTATGCTTAC CAACAGCGCA AGTGACAAGG TCGCTGTGTT AATTCACGGG CTAAGCGACT CTCCCTTTTT CATGCGTGAA ATAGCAAATA TCTTATTCGA ACAAGGTTTT ACCGTTGTGG TGCCGTTACT ACCCGGCCAC GGCAAGCGTG ACGCGGATGA CGACATGTCT GACTGGGATT TGGCTGAACG TTGGCAGAGT CATGTTGATG AAATCATAAC ATTAGCTGAC AGCATGGGTG ACACACTCAT TGTAGGAGGG TTCTCTACGG GTGGCGCGCT TGCAGTAGAA CACTATTTGG ACGGGGCCGA TAACATAGAC GGCTTAATGT TGTTTTCAGG GGCTCTTGCA CTATCCGATA ACGCTGAAGG CATGTCGCGT ATTTGGGGTA TTAAGCTATT AGCTAAAATG ATAGACGGAA GCTACGTGAC ACATGGGCCA AACCCTTACA AATATCCTAA CGTAGCAGGG TTCGCCGGGC TAGAGCTAAT GGATTTAATT AATACAATTC GCGAAAAGAT AGAAGAAGGT AACAATATTG AGGTGCCCTT ATTTGCAGCC CATTCTCAAG CCGATGTCAC TACGCCTATT GCGGGTGTTG AAGGGTTGAT GGATGCTAGC AAAGGGCCGA ATACGTTTTT CGTTATTGAT GAGTCTTATT CACTGTGCCA TGCTGACTTA GTCGTTAATT CCACTTTACT GAACGACATG AATTTCAATG CTAACATGGT TAACCAGCAA GAAGAATGCG CGGTGCCTAA AGCAAACCCA TTGTTTTCTA CTATGCGCTT TATGCTAACC GATTACTTGA ATCAGTTTTA A
|
Protein sequence | MVSLKSFVKM LACCIALASA NNALAQNNEI KESQAQFKAF YEKEWGQTQP CRETALNRFS VCSNVLRNEG NGPFMLTNSA SDKVAVLIHG LSDSPFFMRE IANILFEQGF TVVVPLLPGH GKRDADDDMS DWDLAERWQS HVDEIITLAD SMGDTLIVGG FSTGGALAVE HYLDGADNID GLMLFSGALA LSDNAEGMSR IWGIKLLAKM IDGSYVTHGP NPYKYPNVAG FAGLELMDLI NTIREKIEEG NNIEVPLFAA HSQADVTTPI AGVEGLMDAS KGPNTFFVID ESYSLCHADL VVNSTLLNDM NFNANMVNQQ EECAVPKANP LFSTMRFMLT DYLNQF
|
| |