Gene MADE_03278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03278 
Symbol 
ID6776706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3538543 
End bp3539583 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content45% 
IMG OID642756726 
Productphospholipase/Carboxylesterase 
Protein accessionYP_002127564 
Protein GI196158075 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.235294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTCGT TGAAGTCTTT TGTAAAAATG CTTGCGTGTT GTATTGCGCT AGCTAGTGCC 
AATAATGCGC TGGCCCAAAA TAATGAAATA AAAGAGTCGC AGGCGCAGTT TAAAGCTTTT
TACGAGAAAG AGTGGGGGCA AACCCAGCCT TGTAGGGAAA CCGCGCTTAA CCGTTTTTCT
GTGTGTAGCA ATGTGTTGCG CAATGAAGGC AACGGGCCTT TTATGCTTAC CAACAGCGCA
AGTGACAAGG TCGCTGTGTT AATTCACGGG CTAAGCGACT CTCCCTTTTT CATGCGTGAA
ATAGCAAATA TCTTATTCGA ACAAGGTTTT ACCGTTGTGG TGCCGTTACT ACCCGGCCAC
GGCAAGCGTG ACGCGGATGA CGACATGTCT GACTGGGATT TGGCTGAACG TTGGCAGAGT
CATGTTGATG AAATCATAAC ATTAGCTGAC AGCATGGGTG ACACACTCAT TGTAGGAGGG
TTCTCTACGG GTGGCGCGCT TGCAGTAGAA CACTATTTGG ACGGGGCCGA TAACATAGAC
GGCTTAATGT TGTTTTCAGG GGCTCTTGCA CTATCCGATA ACGCTGAAGG CATGTCGCGT
ATTTGGGGTA TTAAGCTATT AGCTAAAATG ATAGACGGAA GCTACGTGAC ACATGGGCCA
AACCCTTACA AATATCCTAA CGTAGCAGGG TTCGCCGGGC TAGAGCTAAT GGATTTAATT
AATACAATTC GCGAAAAGAT AGAAGAAGGT AACAATATTG AGGTGCCCTT ATTTGCAGCC
CATTCTCAAG CCGATGTCAC TACGCCTATT GCGGGTGTTG AAGGGTTGAT GGATGCTAGC
AAAGGGCCGA ATACGTTTTT CGTTATTGAT GAGTCTTATT CACTGTGCCA TGCTGACTTA
GTCGTTAATT CCACTTTACT GAACGACATG AATTTCAATG CTAACATGGT TAACCAGCAA
GAAGAATGCG CGGTGCCTAA AGCAAACCCA TTGTTTTCTA CTATGCGCTT TATGCTAACC
GATTACTTGA ATCAGTTTTA A
 
Protein sequence
MVSLKSFVKM LACCIALASA NNALAQNNEI KESQAQFKAF YEKEWGQTQP CRETALNRFS 
VCSNVLRNEG NGPFMLTNSA SDKVAVLIHG LSDSPFFMRE IANILFEQGF TVVVPLLPGH
GKRDADDDMS DWDLAERWQS HVDEIITLAD SMGDTLIVGG FSTGGALAVE HYLDGADNID
GLMLFSGALA LSDNAEGMSR IWGIKLLAKM IDGSYVTHGP NPYKYPNVAG FAGLELMDLI
NTIREKIEEG NNIEVPLFAA HSQADVTTPI AGVEGLMDAS KGPNTFFVID ESYSLCHADL
VVNSTLLNDM NFNANMVNQQ EECAVPKANP LFSTMRFMLT DYLNQF