Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03233 |
Symbol | |
ID | 6776899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3491726 |
End bp | 3492619 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642756683 |
Product | Type 4 prepilin-like proteins leader peptide processing enzyme |
Protein accession | YP_002127521 |
Protein GI | 196158032 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0166212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCTA TAATAACCCT TAGCCAGCTA TACCCCGCTA TATTCTATAC CCTTATCTTC TTAGTGAGCT TAATGGTTGG CAGCTTTTTA AATGTAGTGA TCTACCGCTT ACCCATTATG ATGGAGCGCA GCTGGCAGCA GGAATACCAA AGCTATTTTA CCGACGGTGA TACCAGTTTA GATACACCTA ACGCTCCATC GCAAGACGAT ACCTTTAACC TGGTAAAACC AGACAGCACC TGCCCCAGCT GCGGCCACAA AATTCGCGCA TGGGAAAACA TTCCTGTTAT TAGTTACCTA TTTCTAAAGG GCAAATGTGC TAAGTGCAAG GTAGCTATTT CAGTACGCTA TCCGCTGGTT GAGCTTTTCA CTGCAATCGC CTGCACCTTC GCAGCCTATC AATTTGGTGC AACGCCTCAA GCGCTTTGGG CCGTGGTTTT TACCTACGTA CTCGTGGCTT TGCTATTTAT CGATTTAGAT AAAATGTTGT TGCCAGACCA GCTCACGCTC CCTTTGCTTT GGCTTGGGCT GCTGTTAAGT ACTCAAAACA TTTTTGTTGG TACGACCGAC GCCATTATTG GCGCGACGGC AGGCTATTTA AGCTTGTGGT CAGTATATTG GTTATTTAAG CTTGTTACGG GCAAGGAAGG CATGGGCTAT GGCGATTTTA AATTGCTTGC CGCCTTAGGT GCGTTCACAG GCTGGCAAGG GCTCCCCGTT ATCATCTTAC TTTCATCACT GGTGGGCGCC ATTGCAGGTA TTGCTATTAT GGTTGTGCAA AATAAGGGGA AATCCTTAGC CATCCCCTTT GGCCCTTACC TTGCTGTAGC AGGGTGGCTT ACGCTGCTTT TTAAAGCTGA AATTATCACT ACTTACCTTG ATTACGTGCT TTAA
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Protein sequence | MDAIITLSQL YPAIFYTLIF LVSLMVGSFL NVVIYRLPIM MERSWQQEYQ SYFTDGDTSL DTPNAPSQDD TFNLVKPDST CPSCGHKIRA WENIPVISYL FLKGKCAKCK VAISVRYPLV ELFTAIACTF AAYQFGATPQ ALWAVVFTYV LVALLFIDLD KMLLPDQLTL PLLWLGLLLS TQNIFVGTTD AIIGATAGYL SLWSVYWLFK LVTGKEGMGY GDFKLLAALG AFTGWQGLPV IILLSSLVGA IAGIAIMVVQ NKGKSLAIPF GPYLAVAGWL TLLFKAEIIT TYLDYVL
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