| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03208 |
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| Symbol | |
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| ID | 6778333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3466758 |
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| End bp | 3468005 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642756658 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_002127496 |
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| Protein GI | 196158007 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0180116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGATA GCGAGTTCAT GAGCAAAGTT TCATTAGAGA AGGATAAAAT CCGCATTTTA
TTGTTAGAAG GTGTTCACCA AAGCGCTTTG GAAACGCTAA AAAGCAATGG GTATAGCAAC
ATTGAATTTC TTAAAACCTC TCTTCCTGAA GATGAGTTGA TTGAAAAGAT TAAAGACGCC
CACTTTGTAG GTATTCGCTC GCGTACTCAA ATTACAGAGA AAGTGGTTGA TGCTGCACAG
AAGCTTGTAG CAATCGGCTG TTTCTGTATT GGAACAAACC AAGTTGATTT AGAAGCGACC
CAGCGTCGCG GCATTCCCGT GTTTAATGCG CCTTTTTCAA ACACACGCTC GGTCGCTGAG
TTAGTCCTTG GTCAAATTAT CCTTCTTCTT CGTCAAGTGC CTAGCAAAAA TGCCAAAGCG
CACCGCGGCG AATGGGAAAA AACAGCTGTA GGCTCGTATG AAGCTCGCGG TAAAACACTC
GGTATCATTG GCTATGGGCA CATCGGTACC CAGCTGAGTA TTCTTGCTGA ACACCTTGGT
ATGCGTGTTC AGTTCTTTGA TATTGAAGAT AAGCTTGTGC TCGGTAACTC TACACAGGTG
AAATCGTTAG AAAAGCTTCT AAATACCTCA GACGTTGTTT CGCTTCACGT ACCTGAAACA
CCTCAAACTC AAGACATGAT TGGCGAGAAA GAGCTGTCTC AAATGAAAAA AGGCAGCATT
CTTATCAATG CTTCTCGCGG GACCGTGGTT GATATTGATG CACTGGCTAG CGCCCTTGAA
AGCGGCCACC TTAACGGCGC TGCCATCGAC GTATTCCCAG TTGAGCCTAA GTCTAACACT
GAAGAGTTTA CGTCTCCGCT TCGTGCGTTT GACAACGTTA TTCTTACTCC GCATGTAGGG
GGAAGTACGC AAGAAGCACA GGAAAATATT GGTATTGAAG TGGCTGGCAA ACTTGCCAAA
TATAGCGACA ATGGTTCAAC CTTGTCTGCA GTAAACTTCC CTGAAGTATC GCTTCCTGAG
CATACGAACC GTTCACGCCT GCTTCACGTG CACAAAAACC AGCCAGGTAT TCTTACGCAA
ATTAACCAGG CGTTTGCAGA GAAAGGCATT AATATTGAAG CCCAGTACCT TCAAACTAAC
GCAGAAATTG GTTACGTGGT TGTAGATGTG AAAGAAGACC GCGGTTATGA AGCCCTTGCT
GAACTTCAGC AAATTGACGG CACAATAAAA ACCCGTATTT TACACTAA
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| Protein sequence | MRDSEFMSKV SLEKDKIRIL LLEGVHQSAL ETLKSNGYSN IEFLKTSLPE DELIEKIKDA
HFVGIRSRTQ ITEKVVDAAQ KLVAIGCFCI GTNQVDLEAT QRRGIPVFNA PFSNTRSVAE
LVLGQIILLL RQVPSKNAKA HRGEWEKTAV GSYEARGKTL GIIGYGHIGT QLSILAEHLG
MRVQFFDIED KLVLGNSTQV KSLEKLLNTS DVVSLHVPET PQTQDMIGEK ELSQMKKGSI
LINASRGTVV DIDALASALE SGHLNGAAID VFPVEPKSNT EEFTSPLRAF DNVILTPHVG
GSTQEAQENI GIEVAGKLAK YSDNGSTLSA VNFPEVSLPE HTNRSRLLHV HKNQPGILTQ
INQAFAEKGI NIEAQYLQTN AEIGYVVVDV KEDRGYEALA ELQQIDGTIK TRILH
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