Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03202 |
Symbol | |
ID | 6778254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3460530 |
End bp | 3461408 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642756652 |
Product | phage integrase |
Protein accession | YP_002127490 |
Protein GI | 196158001 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000402051 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGGCT TTCGTCAACA TAGAAAGAGC GCAGGTAAAA GTAGAGCGAC CGTGCTTAAA AAGTACGTGG GTAACACCCC AATAACGCAA TTTGATTCAC GTAGCGCGCG AGAATTAGCT CAAGAATTAG CCATTTCTAT GGGAAATTCG ACCCTAAACA GTACATTCAA AGTACTCCGT GCAGCTTTTA GTGAAGCCGT TGTAGACGGG ACTATCACTA ATAACCCATT GTTAGGGTTT AAAATTTCCT CTGCTGTTAA GCGCAGAAAG AGCAAGCAGA AAGATAAAGT ACAACCTTTC ACGTTAACCG AGCTTAAAAA ACTCGCTGCG TTCCAGGATC TACGTGAAAG AACCTATATC CAAGTATGGG CGAAAACAGG ACTGCGGTCC GGTGAGCTGT GCGCGCTTCG ATGGGAGCAT GTCGACTTAG AACGAAAAAC AATAAACATA GATGAAAACT ACGTCACTTA CGCTAAGGAA CTTGGAACCC CTAAAACTGA GGCAAGCGAA CGGACTATAC AACTGGACGA AGAAACAGTG TCTTTGTTGC AGATCCTAGA ACCTGGGAAA CTCCCGTTCG TTTTCCATAA TTCAAGAAGC AAACGTGAGC ACTTTGATAC CTACTCTTTA CGTAGGCTAT TAATAAAAAT GTGTGATGAA TGTGGCGTTT CTTATCGACA CCCGTATAAT CTCCGACACA CTTATGCAAC GATGCGAATT TCTCTTGGGC ATAATTTGTG GGATATAGCC AAACAAATGG GTCATACCTC ACCCAAAATG TTGTTTGAAA CTTACGGTGA TTACATCGAA GAATATGCAG AAAAAACGAC AAATTCGCAC CCTCAACACA CTCGGATTTT TGAAAGTATA GAAAAGTAG
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Protein sequence | MGGFRQHRKS AGKSRATVLK KYVGNTPITQ FDSRSARELA QELAISMGNS TLNSTFKVLR AAFSEAVVDG TITNNPLLGF KISSAVKRRK SKQKDKVQPF TLTELKKLAA FQDLRERTYI QVWAKTGLRS GELCALRWEH VDLERKTINI DENYVTYAKE LGTPKTEASE RTIQLDEETV SLLQILEPGK LPFVFHNSRS KREHFDTYSL RRLLIKMCDE CGVSYRHPYN LRHTYATMRI SLGHNLWDIA KQMGHTSPKM LFETYGDYIE EYAEKTTNSH PQHTRIFESI EK
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