Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03192 |
Symbol | |
ID | 6778232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3452801 |
End bp | 3453526 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642756642 |
Product | ABC-type transport system ATPase component |
Protein accession | YP_002127480 |
Protein GI | 196157991 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAACTT TGAGCGCAAC CAACCTTGCT AAGGCATATA AATCGCGTCA GGTAGTACGC GACGTCAGCC TTTCTGTCTC GACGGGTCAA ATTGTTGGCC TACTTGGCCC CAATGGCGCT GGTAAGACCA CTACATTTTA TATGATTGTG GGATTGGTTA ACCTGGATAA AGGCAAGATT GAAATCGATG ATAATGAGCT TACTCATCAG CCCATGCACG AGCGTGCACG CCGCGGAATT GGCTACCTTC CGCAAGAGGC ATCAATTTTC AGAAAGCTTA CGGTACATGA AAATATCATG GCCATTTTGC AAACCCGTAA GGATTTAAAT TCACAGCAGC AAGAAGAAGA AGCTGACGCG CTACTTGATG AATTTAATAT TAACCATATA CGTAATAGTA CAGGGATGAG TTTGTCCGGT GGTGAACGAC GACGTGTTGA AATAGCACGC GCACTAGCAG CTAATCCGCA ATTTATTTTA TTAGACGAAC CGTTTGCTGG TGTTGATCCA ATATCAGTTA ATGATATAAA GAAGATAATA CAGCATCTTC GAGATAGGGG TATTGGAATC CTTATCACCG ACCATAACGT GCGAGAAACA TTGGATGTTT GTGAGAAAGC GTACATTGTG AGTCATGGCG AGCTTATCGC GCAAGGAACA GCGGAACAGG TTTTAAGTAA TCAAAAAGTA AGGGATGTAT ACCTAGGCGA ACAATTCAGG CTATAG
|
Protein sequence | MATLSATNLA KAYKSRQVVR DVSLSVSTGQ IVGLLGPNGA GKTTTFYMIV GLVNLDKGKI EIDDNELTHQ PMHERARRGI GYLPQEASIF RKLTVHENIM AILQTRKDLN SQQQEEEADA LLDEFNINHI RNSTGMSLSG GERRRVEIAR ALAANPQFIL LDEPFAGVDP ISVNDIKKII QHLRDRGIGI LITDHNVRET LDVCEKAYIV SHGELIAQGT AEQVLSNQKV RDVYLGEQFR L
|
| |