Gene MADE_03192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03192 
Symbol 
ID6778232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3452801 
End bp3453526 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content44% 
IMG OID642756642 
ProductABC-type transport system ATPase component 
Protein accessionYP_002127480 
Protein GI196157991 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTT TGAGCGCAAC CAACCTTGCT AAGGCATATA AATCGCGTCA GGTAGTACGC 
GACGTCAGCC TTTCTGTCTC GACGGGTCAA ATTGTTGGCC TACTTGGCCC CAATGGCGCT
GGTAAGACCA CTACATTTTA TATGATTGTG GGATTGGTTA ACCTGGATAA AGGCAAGATT
GAAATCGATG ATAATGAGCT TACTCATCAG CCCATGCACG AGCGTGCACG CCGCGGAATT
GGCTACCTTC CGCAAGAGGC ATCAATTTTC AGAAAGCTTA CGGTACATGA AAATATCATG
GCCATTTTGC AAACCCGTAA GGATTTAAAT TCACAGCAGC AAGAAGAAGA AGCTGACGCG
CTACTTGATG AATTTAATAT TAACCATATA CGTAATAGTA CAGGGATGAG TTTGTCCGGT
GGTGAACGAC GACGTGTTGA AATAGCACGC GCACTAGCAG CTAATCCGCA ATTTATTTTA
TTAGACGAAC CGTTTGCTGG TGTTGATCCA ATATCAGTTA ATGATATAAA GAAGATAATA
CAGCATCTTC GAGATAGGGG TATTGGAATC CTTATCACCG ACCATAACGT GCGAGAAACA
TTGGATGTTT GTGAGAAAGC GTACATTGTG AGTCATGGCG AGCTTATCGC GCAAGGAACA
GCGGAACAGG TTTTAAGTAA TCAAAAAGTA AGGGATGTAT ACCTAGGCGA ACAATTCAGG
CTATAG
 
Protein sequence
MATLSATNLA KAYKSRQVVR DVSLSVSTGQ IVGLLGPNGA GKTTTFYMIV GLVNLDKGKI 
EIDDNELTHQ PMHERARRGI GYLPQEASIF RKLTVHENIM AILQTRKDLN SQQQEEEADA
LLDEFNINHI RNSTGMSLSG GERRRVEIAR ALAANPQFIL LDEPFAGVDP ISVNDIKKII
QHLRDRGIGI LITDHNVRET LDVCEKAYIV SHGELIAQGT AEQVLSNQKV RDVYLGEQFR
L