Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03165 |
Symbol | |
ID | 6778205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3423200 |
End bp | 3424294 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642756615 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002127453 |
Protein GI | 196157964 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTATAG GCATTGATGC GGACTTGTCT GCCGTAGCCA TTGAAGGGGG CGTAGCTATA TCACGAGGCG TTGAATTAGC CGTTGATGAA ATTAATGCAG CAGGTGGAAT TCTTGGTCGT AAACTAAAGG TAATTTCTAA AGATCACCGA GGTAACCCTG CGCGTGGTGT ATTTAATATT AACCAGTTTT CTGAAATGCC ACACTTACTT GCCGTGGTAG GGGGTGTTCA CACACCTGTT GTTCTTGCTG AAATAGAAGT CATACACGAA AAAAACATAT TAATGCTAGT ACCATGGGCG GCGGGCACAC CTATTGTCGA TAATGATAAA ACACCCAACA ATGTATTTCG CGTATCGGTT CGCGATGCAG AAGCCGCAAG GGTGCTCATT GACTATGTTA AAAACATTGG CCTCTCTAAC GTAGCCCTTG TCTTAGAGCG CACTGGCTGG GGTCGTTCTA ATCTCGCGTC GCTCACCAAA GCCGCAAGTG AAAAAGGCAT TGCGTTCACG TCAACCCACT GGATTAACTG GCAACAAAAG GATTTTTCTG AAGATATTTC TGCCATTAGA AACAACAAGG CTGAGGGCAT AATTTTAGTG ACGAATGTTC CTGAAGGGGT TGTAGCTCTG GATGAAATAG CAAAGCAAGA GTTAACCAAA CTCCCCATAA TTTCACATTG GGGTATCGCC TCTGGACAAT TTGCGTCAGC GCTAGCTAAC CCGATAGGCA TGTATGATAT CTCTGTGCTC CAAACTTTTC ACTTCAGCCA TCAAAAAAAT AGCCAATCGA AACAACTGTT AGAAGCCTAC CACAATAAAT ATGGCTTGGT AGATAGTCAG GCTATTGGCG GTGTTACAGG GCTAGCTCAT GCTTATGATT TAATTCATTT GATCGCTGCG GCTGCCGATA AAGCTGGTAG TATAGAAATT GATAAATTGC GCAGTGCCCT TGAATCTTTG CAGGACGTTT CAGGCGCCGT TAAGCACTAT GACGCCCCAT TTACAAAAGA AAGGCATGAT GCACTTTGGT CAAAGGATTA TTTTATGACG AAGTATAATG ATAAAGGCCA CTTGGTAACA ATAGGCCAAA AATAA
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Protein sequence | MIIGIDADLS AVAIEGGVAI SRGVELAVDE INAAGGILGR KLKVISKDHR GNPARGVFNI NQFSEMPHLL AVVGGVHTPV VLAEIEVIHE KNILMLVPWA AGTPIVDNDK TPNNVFRVSV RDAEAARVLI DYVKNIGLSN VALVLERTGW GRSNLASLTK AASEKGIAFT STHWINWQQK DFSEDISAIR NNKAEGIILV TNVPEGVVAL DEIAKQELTK LPIISHWGIA SGQFASALAN PIGMYDISVL QTFHFSHQKN SQSKQLLEAY HNKYGLVDSQ AIGGVTGLAH AYDLIHLIAA AADKAGSIEI DKLRSALESL QDVSGAVKHY DAPFTKERHD ALWSKDYFMT KYNDKGHLVT IGQK
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