Gene MADE_03165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03165 
Symbol 
ID6778205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3423200 
End bp3424294 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content43% 
IMG OID642756615 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002127453 
Protein GI196157964 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTATAG GCATTGATGC GGACTTGTCT GCCGTAGCCA TTGAAGGGGG CGTAGCTATA 
TCACGAGGCG TTGAATTAGC CGTTGATGAA ATTAATGCAG CAGGTGGAAT TCTTGGTCGT
AAACTAAAGG TAATTTCTAA AGATCACCGA GGTAACCCTG CGCGTGGTGT ATTTAATATT
AACCAGTTTT CTGAAATGCC ACACTTACTT GCCGTGGTAG GGGGTGTTCA CACACCTGTT
GTTCTTGCTG AAATAGAAGT CATACACGAA AAAAACATAT TAATGCTAGT ACCATGGGCG
GCGGGCACAC CTATTGTCGA TAATGATAAA ACACCCAACA ATGTATTTCG CGTATCGGTT
CGCGATGCAG AAGCCGCAAG GGTGCTCATT GACTATGTTA AAAACATTGG CCTCTCTAAC
GTAGCCCTTG TCTTAGAGCG CACTGGCTGG GGTCGTTCTA ATCTCGCGTC GCTCACCAAA
GCCGCAAGTG AAAAAGGCAT TGCGTTCACG TCAACCCACT GGATTAACTG GCAACAAAAG
GATTTTTCTG AAGATATTTC TGCCATTAGA AACAACAAGG CTGAGGGCAT AATTTTAGTG
ACGAATGTTC CTGAAGGGGT TGTAGCTCTG GATGAAATAG CAAAGCAAGA GTTAACCAAA
CTCCCCATAA TTTCACATTG GGGTATCGCC TCTGGACAAT TTGCGTCAGC GCTAGCTAAC
CCGATAGGCA TGTATGATAT CTCTGTGCTC CAAACTTTTC ACTTCAGCCA TCAAAAAAAT
AGCCAATCGA AACAACTGTT AGAAGCCTAC CACAATAAAT ATGGCTTGGT AGATAGTCAG
GCTATTGGCG GTGTTACAGG GCTAGCTCAT GCTTATGATT TAATTCATTT GATCGCTGCG
GCTGCCGATA AAGCTGGTAG TATAGAAATT GATAAATTGC GCAGTGCCCT TGAATCTTTG
CAGGACGTTT CAGGCGCCGT TAAGCACTAT GACGCCCCAT TTACAAAAGA AAGGCATGAT
GCACTTTGGT CAAAGGATTA TTTTATGACG AAGTATAATG ATAAAGGCCA CTTGGTAACA
ATAGGCCAAA AATAA
 
Protein sequence
MIIGIDADLS AVAIEGGVAI SRGVELAVDE INAAGGILGR KLKVISKDHR GNPARGVFNI 
NQFSEMPHLL AVVGGVHTPV VLAEIEVIHE KNILMLVPWA AGTPIVDNDK TPNNVFRVSV
RDAEAARVLI DYVKNIGLSN VALVLERTGW GRSNLASLTK AASEKGIAFT STHWINWQQK
DFSEDISAIR NNKAEGIILV TNVPEGVVAL DEIAKQELTK LPIISHWGIA SGQFASALAN
PIGMYDISVL QTFHFSHQKN SQSKQLLEAY HNKYGLVDSQ AIGGVTGLAH AYDLIHLIAA
AADKAGSIEI DKLRSALESL QDVSGAVKHY DAPFTKERHD ALWSKDYFMT KYNDKGHLVT
IGQK