Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03099 |
Symbol | |
ID | 6777885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3354944 |
End bp | 3355435 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642756548 |
Product | sensory box/GGDEF protein |
Protein accession | YP_002127387 |
Protein GI | 196157898 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.727422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAC ATTTAGATGA GTTCCAAGAA TTCCATTGGA TGATGGATAT GCTTCAGACG GTCGATGTGG GTATTGTTGT TTTAGATAGA AACTTTACTG TTAAAGTTTG GAATGGCTTT ATGGAAAGTC ACAGCGGCCT TCTGCCTAGT GAAGTAAGAG ACAAGACCTT GTTCTCACTA TTTCCTGCCA TTAAGCAAGA CTGGTTTATG AAAAAAGCGA AGCCTGTCTT CGACTTAAAA ACACGCGCGT TCATGACATG GGAGCAGCGC CCCTATTTGT TCAAGTTTCC CAACTACCGG CCGATTACAG GTAGTGAGTC TTTCATGTAT CAAAACATCA CGCTTTCTCC ACTTACATCA ACTACGGGCA AAGTGGATTT TATCAGTATG ATGATTTATG ACATGACTGA TGTGGCGGTA GGTAAAAAGC AACTTGAGGC GTTACAGGTA ACCATGTCTG AAGCCCAAGA AGCGAAAAGT TCCTATTCCT AA
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Protein sequence | MSQHLDEFQE FHWMMDMLQT VDVGIVVLDR NFTVKVWNGF MESHSGLLPS EVRDKTLFSL FPAIKQDWFM KKAKPVFDLK TRAFMTWEQR PYLFKFPNYR PITGSESFMY QNITLSPLTS TTGKVDFISM MIYDMTDVAV GKKQLEALQV TMSEAQEAKS SYS
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