Gene MADE_03095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03095 
Symbol 
ID6777792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3350310 
End bp3351335 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content48% 
IMG OID642756544 
Productputative oxygen-independent coproporphyrinogen III oxidase 
Protein accessionYP_002127383 
Protein GI196157894 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.453176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCACC TGCTTGATGA TTTAGCCATT GATGCAAAGC GTATTGGTGA CCGCGTTGTT 
GAAACTATTT TCATTGGTGG CGGCACACCC AGCTTATTTT CAGCTGATGC CATGGCAGAT 
ATCTTAAACG GGGTAAAAGC GCGCGTTAAC CTAAGCGACA ATGCTGAAAT CACCATGGAA 
GCGAACCCAG GTACGGTAGA GGCAGGAAAG TTTGCCGGCT TTTATCAGGC GGGCGTGAAC 
CGCATCTCCG TTGGTATACA GAGCTTCCAG CCTAAGCATT TAAAGGTGCT TGGTCGCATT 
CACAATGAAA GCCAAGCTGA AAACGCGGTA AAACAAGCAC ATAGTGCGGG GTTGCCCACG 
TTTAACCTAG ATCTGATGCA CGGCCTTCCC GAGCAAAGCG TTGACAATGC TATGTCAGAT 
TTAAAGCAAG GCATTGCTTT AAATCCGTAT CACTTGTCGT GGTATCAGCT GACTATCGAA 
CCCAATACGC CTTTCTACTC GAAACCGCCT GAATTGCCCG ACGATGACAT TTTGTGGGAA 
ATACAGGAAC AGGGCCATAA GCTTTTAGAA AACGCAGGCT ATCAGCAGTA TGAAATTTCA 
GGCTATGCCA AAGCGGGCCA CCAGTGTCGT CACAACTTAA ATTACTGGCG CTTTGGTGAT 
TACTTAGGCA TTGGCTGTGG AGCCCATGGA AAAATCACCG ATGCGGCTAA TGGTACTATT 
CACCGTACTG TTAAGGTTAA GCATCCAAGG GGCTACATGG AAATGAGCCG CCCTTACTTG 
GATACGCAAT CTCAAGTTGA AGCTGGCGAC TTACCCTTCG AGTTCTTTAT GAACCGCTTT 
CGCTTGGTGG AGCCCTGCCC TATCAGTGAT TTTAGCGACT TTACCGGTAT CGCTATAACT 
GATGAAGTAG AGCGTGCCCT GTGTGATGCA CAGCATCAAG GGCTGTTATC CATATCGGAC 
ACCCACTGGC AAGTAACCGC AAAAGGTCGT CGGTATTTAA ATTCGCTCTT GTCTTGCTTT 
GTTTAG
 
Protein sequence
MAHLLDDLAI DAKRIGDRVV ETIFIGGGTP SLFSADAMAD ILNGVKARVN LSDNAEITME 
ANPGTVEAGK FAGFYQAGVN RISVGIQSFQ PKHLKVLGRI HNESQAENAV KQAHSAGLPT 
FNLDLMHGLP EQSVDNAMSD LKQGIALNPY HLSWYQLTIE PNTPFYSKPP ELPDDDILWE 
IQEQGHKLLE NAGYQQYEIS GYAKAGHQCR HNLNYWRFGD YLGIGCGAHG KITDAANGTI 
HRTVKVKHPR GYMEMSRPYL DTQSQVEAGD LPFEFFMNRF RLVEPCPISD FSDFTGIAIT 
DEVERALCDA QHQGLLSISD THWQVTAKGR RYLNSLLSCF V