Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03094 |
Symbol | |
ID | 6777646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3349601 |
End bp | 3350203 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642756543 |
Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
Protein accession | YP_002127382 |
Protein GI | 196157893 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTC CAGAAAAAAT TGTTCTCGCC ACAGGTAACC AAGGCAAGGT GCGTGAGTTT GCATCCTTAT TTGCAGATTA CGGTGTAGAC GTAGTAGCGC AAAAGGAATT AGGTGTATCT GATGTACCGG AAACGGGAAC CACATTCGTT GAAAATGCCA TTATTAAAGC GCGCCATGCC GCACAGGTGA CCGGCCTTCC TGCTATTGCT GACGACTCAG GCTTGGTGGT GGATGCCCTA GGCGGTGAAC CCGGCATCTA TTCAGCACGC TATGCTGGCG CTGATGCAAC TGATGATACC AATATCGACA AGCTATTAGC TTCCCTTGAT GGCGAAACTC ATCGCAAGGC ACACTTCTTC TGTACTTTAG TGTTCATGCG TCATGCCGAC GACCCTGTAC CGCTGGTTAG CCAAGGTAAA TGGGAAGGGG AAATTTTAAG CGCACGTTCT GGTAACGACG GTTTTGGTTA CGACCCTGTG TTCCACGTGC CAACTCACGG CTGCACCGCT GCTGAATTGG AAAAGGCCGA GAAAAACCGC ATAAGCCACC GGGGTAACGC CCTTAGTATT TTGCTTGATA CAATGAGAGC AACGTTTGCG TAA
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Protein sequence | MKFPEKIVLA TGNQGKVREF ASLFADYGVD VVAQKELGVS DVPETGTTFV ENAIIKARHA AQVTGLPAIA DDSGLVVDAL GGEPGIYSAR YAGADATDDT NIDKLLASLD GETHRKAHFF CTLVFMRHAD DPVPLVSQGK WEGEILSARS GNDGFGYDPV FHVPTHGCTA AELEKAEKNR ISHRGNALSI LLDTMRATFA
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