Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03081 |
Symbol | |
ID | 6776852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3331119 |
End bp | 3333710 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642756530 |
Product | DNA mismatch repair protein(MutS) |
Protein accession | YP_002127369 |
Protein GI | 196157880 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGCC AATATTTAAG CATAAAGGCG CAACATCCGA ATATTCTACT TTTTTATCGC ATGGGCGATT TTTACGAGTT ATTTTATGAC GATGCCAAAA AAGCTGCTGA ATTACTGGAC ATTTCGCTTA CGGCGCGAGG TAAATCGGGT GGCGAGCCCA TTCCCATGGC AGGCGTGCCT TATCATGCGG TAGAAAGCTA CCTATCGCGT TTAGTAAAAA TGGGGGAGTC GGTTGCCATT TGTGAACAAG TTGGCGACCC AGCGACGAGC AAAGGCCCCG TTGAGCGTGC CGTACAGCGC ATTGTTACGC CGGGCACTGT AACCGACGAA GCTTTATTAG AAGAGCGTCG CGACAATATT CTTGCCGCTG TGTGCGGCCA TAGCATGCAT TATGGGTTAG CCACATTAGA TGTAACTAGC GGTCGCTTTG TGGTGTTCGA GTGCGATAGT GATGAAAGCT TACTGGCTGA AATTCAGCGC ATTAACCCGG CTGAGTTACT TTACCCTGAA GGCTTTGAAA GCCTGTCTCT TGTTGAAAAT CGCAAAGGGC TACGCAGGCG TCCCGAGTGG GAATTCGACG TAGATACTGC AAATGAACAG CTTAACGCCC AGTTTGAAAC TAAAACATTA GATGGCTTTG GTATAAAAGG CGTCACTAAA GGATTAGGCG CAGCAGGTTG TGTTTTACAA TATGTAAAAG ATACCCAGCG CACTGCCCTG CCCCACATTC GCCGCATTCA GACTGAACAG CAAGACAGCC GTGTTCAGCT TGATGCCGCA ACGCGCAGAA ACCTGGAACT TACCCATAAT TTGTCTGGCG GTCAGGAAAA TACCCTGTTC AGCGTAATGG ACACTACCAC CACGGCCATG GGCAGTCGTA TGTTACAGCG AATCATTCAC TCGCCGCTGA CCGACCAGCA TGAGCTCCAA AGCCGCTTAG ACGCAATAGA CACCTTTATT AATGACGATC CTGAAGATAT CCGCAATGCG CTAAAACACA TTGGCGACAT AGAGCGTATT ATGGCGCGTT TAGCCCTTCG CTCGGCGCGC CCTCGGGATT TTGCACGTTT AAAAAATGCG TTTAATGCAC TGCCTGATTT GCAAGATGCT CTTGCCCGTT TTGACACAGG ACAAATTAGA AGTATTGGCG AAACCATTGG CACTTACCCT GAGCTTCAAG CCCTGTTAAA CAGCGCTATA ATCGATAACC CACCAGTTGT TATACGCGAT GGTGGCGTAA TTGCCGAAGG CTATAATGCT GAACTGGATG AATTGCGTAA GCTATCACAA GGCGCTACCG ACTACTTAGA TGCGATGGAG CAACGTGAGC GTGAACGCAC AGGCATTTCC ACATTGAAAG TGGGCTATAA CAAAGTGCAC GGGTTTTTTA TTGAAATTAG TCGTGCTAAC AGCGCTTTGG CCCCCGCCGA ATACATCCGA AGACAGACCC TTAAGAACAC CGAACGTTAC ATTACGCCTG AGCTTAAAGA ACACGAGGAC AAAGTGCTAA GTAGCCAAGG GGCTGCACTT GCCCTTGAAA AACAGCTTTA TGAAGCCTTG TTCGACAATT TTGCGCCATA CCTCAACAAG TTAATTGAAA CCGCCGCAGC GCTTGCCAAG CTCGACGTGC TGTGCTGTTT TGCCGAACGC GCGGTATCGC TCGATTGGCA TCGGCCAAAA TTGAGCCAAG AATGTGCGCT TACTTATGAT GCCGGTCGCC ACCCTGTGGT TGAGAACGTA ATGAAAGACC CCTTCATTGC CAACCCACTG CAACTGGATA CTGAGCGCCG TATGCTCGTT ATTACCGGCC CAAACATGGG CGGTAAATCG ACCTACATGC GTCAAACAGC GCTTATTGCT TTATTGGCCT GCATCGGCAG TTATGTGCCT GCTGAAAACG CCCACATCGG CAAGCTGGAT CGCATATTCA CCCGGATTGG CGCATCAGAT GACCTGGCCT CTGGCCGCTC AACCTTCATG GTTGAAATGA CCGAAACGGC AAATATTCTT AATAACGCGA CTGAAAACTC ACTGGTGTTA ATGGATGAAA TTGGCCGTGG TACCAGCACC TATGATGGTT TATCGCTGGC ATGGGCTTGC GCGAGCTACT TGGCGAAGCA ACTCAACGCC TACACCCTTT TTGCGACCCA CTATTTTGAG CTGACCGAAC TACCCGAAAC GCAAGCAGGC GTTGTGAACG TGCATCTTAA TGCGATGGAG TTTGAAGACA CCATTCGCTT TATGCATACC GTATCTGAAG GCGCCGCGAA CAAGAGCTTT GGTTTACAGG TTGCGCAACT TGCTGGTGTA CCAAAACCTG TGATTAAAGC CGCTCAGCAA AAGCTCGCTA TTTTAGAATC ATCACACGTC ATGACCAGTG ATGAATCAAG GGGCAGTGAC ACTTCACAAG CGCAAAGCAA CACCTCCAGA AAAATTGACA ACGGTTCAAA TGCGAAAGGA CAAGCAGAAA TGCTTTTTCC AGACAAACCG CACCCCGTGG TGGAAGCACT TGAAAACTTA TCGCCCGATG AGCTATCTCC TCGCCAAGCG CTCGACCTCA TCTACACCCT TAAACGCTTA AGTCAATCGT AA
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Protein sequence | MMRQYLSIKA QHPNILLFYR MGDFYELFYD DAKKAAELLD ISLTARGKSG GEPIPMAGVP YHAVESYLSR LVKMGESVAI CEQVGDPATS KGPVERAVQR IVTPGTVTDE ALLEERRDNI LAAVCGHSMH YGLATLDVTS GRFVVFECDS DESLLAEIQR INPAELLYPE GFESLSLVEN RKGLRRRPEW EFDVDTANEQ LNAQFETKTL DGFGIKGVTK GLGAAGCVLQ YVKDTQRTAL PHIRRIQTEQ QDSRVQLDAA TRRNLELTHN LSGGQENTLF SVMDTTTTAM GSRMLQRIIH SPLTDQHELQ SRLDAIDTFI NDDPEDIRNA LKHIGDIERI MARLALRSAR PRDFARLKNA FNALPDLQDA LARFDTGQIR SIGETIGTYP ELQALLNSAI IDNPPVVIRD GGVIAEGYNA ELDELRKLSQ GATDYLDAME QRERERTGIS TLKVGYNKVH GFFIEISRAN SALAPAEYIR RQTLKNTERY ITPELKEHED KVLSSQGAAL ALEKQLYEAL FDNFAPYLNK LIETAAALAK LDVLCCFAER AVSLDWHRPK LSQECALTYD AGRHPVVENV MKDPFIANPL QLDTERRMLV ITGPNMGGKS TYMRQTALIA LLACIGSYVP AENAHIGKLD RIFTRIGASD DLASGRSTFM VEMTETANIL NNATENSLVL MDEIGRGTST YDGLSLAWAC ASYLAKQLNA YTLFATHYFE LTELPETQAG VVNVHLNAME FEDTIRFMHT VSEGAANKSF GLQVAQLAGV PKPVIKAAQQ KLAILESSHV MTSDESRGSD TSQAQSNTSR KIDNGSNAKG QAEMLFPDKP HPVVEALENL SPDELSPRQA LDLIYTLKRL SQS
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