| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03048 |
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| Symbol | |
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| ID | 6776819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3298513 |
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| End bp | 3298887 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642756497 |
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| Product | SmpA/OmlA family lipoprotein |
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| Protein accession | YP_002127336 |
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| Protein GI | 196157847 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00049947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACCA AGGTCATTCG CCTAATTTTA GCTGGCGTCG CGTTATACGC GGTGTTTGTT
TTTATGGTTA TCGCTTTTTA CCCCGATAAA CCAGAAAATA TGGACTGGAA AGACCGTGAA
GAATACAACC GCGTTCAAAT TACTAAATTA AAATTAGGCA GTACACGAGA AGAGGTGCTT
GCGCTTCTTG GCTCGCCTGA TATTACCGAG GCCAAACGAC AGGGGTCAAT GGCTATTCAA
GTCATGTTTT TCAGAACCCA GCACGTTCGA GCCGACGGTT TGACTACACA GGACGAATGT
ACCCCACTCT TATTTGAAAA TGACAAGCTA ATTGCATGGG GTGAAGGGGC CTACTCCAGT
TATCAAAAAA GTTAA
|
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| Protein sequence | MNTKVIRLIL AGVALYAVFV FMVIAFYPDK PENMDWKDRE EYNRVQITKL KLGSTREEVL
ALLGSPDITE AKRQGSMAIQ VMFFRTQHVR ADGLTTQDEC TPLLFENDKL IAWGEGAYSS
YQKS
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