| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03026 |
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| Symbol | |
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| ID | 6777588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3275924 |
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| End bp | 3276586 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756475 |
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| Product | hypothetical protein |
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| Protein accession | YP_002127314 |
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| Protein GI | 196157825 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.287922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGG TAATGAAAGC TGAAAAGGTG ATAATGAAGC GAGCAAAAGG AAGTGGTATT
CGCGCACAAA CGGGTGTAGG TCTGATAGAG ATCTTAATCA CGCTATTTAT CCTGGCGGTA
GGCTTGCTTG GCGTTGCTGC ATTACAATTT ACTGGTTCAT TCGCTAACAA GGATGCCATT
AGTCGTACGC AAGCTGAAAT GGTTGCTGCG CAGGTTGCTG AACGTTTAAG AGCTGCAGCG
CGGCCTGCTA CGGTAGGCGA TGGCATGGTA GCGAATAACG CCTACTTTTC AAATACGACT
TATAACTTTT CAGGTCTAAG CTGTTCGAAT GCTTCTCATC CCTATCACGG CTGCTGTCTA
TCGAGACCCG CTGATATTCC CAATTGCGAA GGGCAAACCT GCAGCGAAAT CCAAATGGCC
GCTTACGATG GCTGGGCCCT ATCTTGCTCG GCAGTGCAAA CCAACCCTCA AACGAAGGTG
TCGGTCTCCT GTGATGACAC CAATAACGCT GACATTTATA GCTGTAGTGC AGGTTCTAGG
GTAGAAATAT TGCTAACCTG GCCAGTTGCC TCATCAGGAA ATCAAATATA TACGCTCAAC
TCACGTTGTA ACCCCAACGA TGGTGATAGT AACGCTTGTG TGTTTAAGGA CATAACACTA
TGA
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| Protein sequence | MAKVMKAEKV IMKRAKGSGI RAQTGVGLIE ILITLFILAV GLLGVAALQF TGSFANKDAI
SRTQAEMVAA QVAERLRAAA RPATVGDGMV ANNAYFSNTT YNFSGLSCSN ASHPYHGCCL
SRPADIPNCE GQTCSEIQMA AYDGWALSCS AVQTNPQTKV SVSCDDTNNA DIYSCSAGSR
VEILLTWPVA SSGNQIYTLN SRCNPNDGDS NACVFKDITL
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