Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02986 |
Symbol | nrdR |
ID | 6777338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3238455 |
End bp | 3238904 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642756437 |
Product | transcriptional regulator NrdR |
Protein accession | YP_002127276 |
Protein GI | 196157787 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000784776 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTGCC CGTTTTGTTC CGAACAAGAA ACAAAAGTCA TTGATTCTCG TTTAGTTGCA GAAGGGCAAC AGGTGCGAAG ACGACGCGAA TGTATGGTGT GTCACGAGCG CTTTACTACA TTTGAAAGTG CAGAGCTTGT GATGCCCCGC GTTATTAAAC GCGATGGCTC GCGTGAACCA TTCAACGAAG ATAAACTTCG TGCTGGGCTA CAGCGCGCGC TTGAAAAGCG CCCTGTTAGT ACCGAAAAAG TAGAACAATG TATCCTTTCG CTTAAATCAC AGTTGCGCGC AACCGGTGAA CGAGAAGTAA GCAGCGAACT ACTTGGCAAC CTAATAATGA AAGCCCTCAA AGAACTCGAC AAAGTCGCCT ATGTTCGGTT CGCTTCAGTT TATCGTTCCT TCGAAGACAT TCGTGAATTT GGAGAAGAGA TTGCACGACT AGGGGATTAA
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Protein sequence | MFCPFCSEQE TKVIDSRLVA EGQQVRRRRE CMVCHERFTT FESAELVMPR VIKRDGSREP FNEDKLRAGL QRALEKRPVS TEKVEQCILS LKSQLRATGE REVSSELLGN LIMKALKELD KVAYVRFASV YRSFEDIREF GEEIARLGD
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