| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02965 |
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| Symbol | |
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| ID | 6778847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3211827 |
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| End bp | 3213545 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642756416 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_002127255 |
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| Protein GI | 196157766 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.33689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACTA GTCAATATTT GCTTGCCACG CAGAAAGAAA CACCTGCAGA CGCAGAGGTT
ATTAGCCACC AGCTTATGCT TAGAGCTGGC ATGATCAGAA AGCTAGCTTC AGGTCTTTAC
ACTTGGCTAC CTTCTGGTCT TCGTGTACTA AACAAAGTAG CCAATATTGT TCGCGAAGAA
ATGAACAAAG CAGGTGCTAT TGAGGTGCTA ATGCCCGTTG TTCAGCCCGC GGATTTGTGG
GAAGAATCTG GCCGTTGGGA AGAATACGGC CCTGAACTAC TTCGCGTTAA AGACCGCCAC
CAGCGAGATT TCGTGCTAGG TCCAACCCAT GAAGAGGTGA TCACGGCGCT TGTACGCAAT
GAAATTAGCA GCTACAAGCA GCTTCCTTTG AATCTGTATC AGGTTCAAAC CAAATTCCGA
GACGAAGTTC GCCCTCGTTT CGGTATTATG CGCGGTCGCG AATTTACAAT GAAAGACGCC
TACAGCTTTC ACTTGGAAGA TAGCTGCTTA GAAGAGACCT ACCAGAAAAT GTACGACGCC
TACTGTGCGA TTTTCTCTCG CATGGGGCTC GATTTCAGAG CGGTTATTGC TGACTCTGGC
TCTATTGGTG GTAACCACTC GCACGAATTC CACGTACTTG CTGAATCAGG TGAAGATGCT
ATCGCGTTTT CAAGCGACAG CGATTACGCC GCTAATGTTG AAATGGCTGC GGCTGTTGCG
CCTGAAAAAG CAGTGCCTTC CGGCGCCGAT GTTGAAACCA AAGATGCCAA AGGCAAAGAC
TTTAATGCGA TTTTAAAGAG TGTCGATGCC AACGCTACTA ACGCCGTTAA AGTCGTATTA
GTAAAAGGGG CTAATGAACT CAATGATAAA GGCGAAGACG TTGTTTGTGA TAAATGGGTA
GCGCTCGTAC TACGTGCAGA CCATGAGCTA AACGACATTA AAGCTGAAAA AATAGACGGC
GTTGCGATTC CTCTTGTTGA AGCGTCATTT GAACAAGCAA AAGATGTGCT TGGTGTATCG
CCTTTCTTTG CAGATGCAAC TAACCTGCCC GTACCTGCTT ACGTTGACGC AAGTGCAGCA
GCCCTTGCTG ATTTCACAAC AGGTGCTGGC GCAGGCGGAA AAGTTAACGT CAACGTTAAC
TGGCCAGATG GTATCAATAC CGTTGATATC CGCAATGTCG TTGCCGGCGA CGCATCACCT
GATGGCCAAG GTACGCTCGA TATCAAACGC GGTATTGAAG TAGGTCATAT CTTCCAGCTT
GGTAGAAAAT ATTCAGAAGC AATGAACTGC GGTGTATTGA GCGAAACAGG CAAGCACCAA
ACCCTTACTA TGGGCTGTTA CGGTATTGGT GTATCGCGTA TTGTGGCGGC GGCCATTGAG
CAAAATCACG ATAAATTTGG CATAAAGTGG CCAGATCCTA TCGCACCGTT TAAAATTGCA
TTAATACCAA TGAATATGCA TAAGTCTCAC CGTATCAAAG AAGCAGCCGA AGCCCTTTAT
GAAGAGCTTG TTGCATTAGG CATAGAAGTG CTATTTGACG ATAGAAAAGA GCGCCCGGGT
GTTATGTTCA ATGATATGGA ATTAATTGGC ATACCTCATA GTATTGTTAT TGGTGAAAGA
AACCTAGATA ATCAACAGGT TGAGTATAAA AATAGACGTA CTGGCGAGAA GCAGTTATTA
GACCTCAGCG CAGCAAAAGA ATTTGTAGCC GCACTCTAA
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| Protein sequence | MRTSQYLLAT QKETPADAEV ISHQLMLRAG MIRKLASGLY TWLPSGLRVL NKVANIVREE
MNKAGAIEVL MPVVQPADLW EESGRWEEYG PELLRVKDRH QRDFVLGPTH EEVITALVRN
EISSYKQLPL NLYQVQTKFR DEVRPRFGIM RGREFTMKDA YSFHLEDSCL EETYQKMYDA
YCAIFSRMGL DFRAVIADSG SIGGNHSHEF HVLAESGEDA IAFSSDSDYA ANVEMAAAVA
PEKAVPSGAD VETKDAKGKD FNAILKSVDA NATNAVKVVL VKGANELNDK GEDVVCDKWV
ALVLRADHEL NDIKAEKIDG VAIPLVEASF EQAKDVLGVS PFFADATNLP VPAYVDASAA
ALADFTTGAG AGGKVNVNVN WPDGINTVDI RNVVAGDASP DGQGTLDIKR GIEVGHIFQL
GRKYSEAMNC GVLSETGKHQ TLTMGCYGIG VSRIVAAAIE QNHDKFGIKW PDPIAPFKIA
LIPMNMHKSH RIKEAAEALY EELVALGIEV LFDDRKERPG VMFNDMELIG IPHSIVIGER
NLDNQQVEYK NRRTGEKQLL DLSAAKEFVA AL
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