Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02892 |
Symbol | |
ID | 6775276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3142614 |
End bp | 3143756 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756341 |
Product | putative sensory box sensor histidine kinase in two-component regulatory system |
Protein accession | YP_002127182 |
Protein GI | 196157693 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTTTG ACAGCACACC CCAATCAACT GAGTACTCAG CATCAAGCTA TGCGTTAGAT AGTATTGATA ATGCGATATC TCGTGATGAA TACGACCCTT CAAGCAGTGA CGATATTTCG TCTTTACGGT TGCAGGCGAG TCGACTTGAA CACTTACTTC AGGTAATGCC TGCGGGCGTT ATTGTTATAG ACGGCAAAGG GATCGTACGC CAAGCCAATG AACAAGCGAA AGCACTGTTA GGTGAACCGC TTGAAGAGGA AGTGTGGCGA AGTATTATCA CGCGCTCATT CAAGCCCCGC GCTGACGATG GCCACGAAGT TTCACTTGTT GACGGTCGCC GAGTGAAGCT TTCTATCACG CCATTAGAAA ATGAGCCTGG GCAATTAATT GTTATTACCG ACTTAACCGA AACGCGACAG CTGCAAGCAC GCGTGAGTCA TATGCAGCGT CTGTCCTCTT TGGGAAAAAT GGTGGCATCC CTTGCTCACC AAATTCGTAC GCCTCTTTCT GCGGCCATGC TCTATGCGTC TAATTTAACG CGCAAAGGCT TAGGGCAAGA AGCACAAACT CAATTTGCAA ACAAGCTAAC TGACAGGCTT AAAGAGCTAG AGAGTCAGGT TAACGACATG CTGCTTTTCG CTAAGTCAGG GGAAGAACAA GTTGTCAGCC AAATTAGCTT GGGAGAGTTG TTTACTTCAA TTGAAGGCAG TGCCCAAACC ATGATAGTGC AAGCACATCA AACATTAGGG TTTTCTGGTT TTGAACAAGA GGTGTCGATA ACCGGCAACC TTACTGCACT TCAAGGTGCG CTATTAAACC TTATTCACAA CGCCAGCCAA GTAACACCAA AAGGTGAGCT TGTGGCTGTT GACGCTTCGG TCTCTGGAAA TCGTTTAAAT ATCGCTGTAA CTGATAAAGG CCCAGGCGTA CCTGAAGGCC TCAAACACAA AATATTTGAG CCATTTTTCA CCACAAAAAA CAACGGCACC GGCCTTGGTT TGGCGGTGGT TAAGTCGGTC GTCAATGCGC ACAACGGTAC CCTTAGTGTA TTTAATACAC CTGAAGGCGG CGCTTGCTTT AGCGTTTCTT TGCCATGCAA AGCGAGTACT CAATCATCAC ATACATTGAC CCATGTTGCG TAA
|
Protein sequence | MAFDSTPQST EYSASSYALD SIDNAISRDE YDPSSSDDIS SLRLQASRLE HLLQVMPAGV IVIDGKGIVR QANEQAKALL GEPLEEEVWR SIITRSFKPR ADDGHEVSLV DGRRVKLSIT PLENEPGQLI VITDLTETRQ LQARVSHMQR LSSLGKMVAS LAHQIRTPLS AAMLYASNLT RKGLGQEAQT QFANKLTDRL KELESQVNDM LLFAKSGEEQ VVSQISLGEL FTSIEGSAQT MIVQAHQTLG FSGFEQEVSI TGNLTALQGA LLNLIHNASQ VTPKGELVAV DASVSGNRLN IAVTDKGPGV PEGLKHKIFE PFFTTKNNGT GLGLAVVKSV VNAHNGTLSV FNTPEGGACF SVSLPCKAST QSSHTLTHVA
|
| |