Gene MADE_02892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02892 
Symbol 
ID6775276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3142614 
End bp3143756 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content47% 
IMG OID642756341 
Productputative sensory box sensor histidine kinase in two-component regulatory system 
Protein accessionYP_002127182 
Protein GI196157693 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTG ACAGCACACC CCAATCAACT GAGTACTCAG CATCAAGCTA TGCGTTAGAT 
AGTATTGATA ATGCGATATC TCGTGATGAA TACGACCCTT CAAGCAGTGA CGATATTTCG
TCTTTACGGT TGCAGGCGAG TCGACTTGAA CACTTACTTC AGGTAATGCC TGCGGGCGTT
ATTGTTATAG ACGGCAAAGG GATCGTACGC CAAGCCAATG AACAAGCGAA AGCACTGTTA
GGTGAACCGC TTGAAGAGGA AGTGTGGCGA AGTATTATCA CGCGCTCATT CAAGCCCCGC
GCTGACGATG GCCACGAAGT TTCACTTGTT GACGGTCGCC GAGTGAAGCT TTCTATCACG
CCATTAGAAA ATGAGCCTGG GCAATTAATT GTTATTACCG ACTTAACCGA AACGCGACAG
CTGCAAGCAC GCGTGAGTCA TATGCAGCGT CTGTCCTCTT TGGGAAAAAT GGTGGCATCC
CTTGCTCACC AAATTCGTAC GCCTCTTTCT GCGGCCATGC TCTATGCGTC TAATTTAACG
CGCAAAGGCT TAGGGCAAGA AGCACAAACT CAATTTGCAA ACAAGCTAAC TGACAGGCTT
AAAGAGCTAG AGAGTCAGGT TAACGACATG CTGCTTTTCG CTAAGTCAGG GGAAGAACAA
GTTGTCAGCC AAATTAGCTT GGGAGAGTTG TTTACTTCAA TTGAAGGCAG TGCCCAAACC
ATGATAGTGC AAGCACATCA AACATTAGGG TTTTCTGGTT TTGAACAAGA GGTGTCGATA
ACCGGCAACC TTACTGCACT TCAAGGTGCG CTATTAAACC TTATTCACAA CGCCAGCCAA
GTAACACCAA AAGGTGAGCT TGTGGCTGTT GACGCTTCGG TCTCTGGAAA TCGTTTAAAT
ATCGCTGTAA CTGATAAAGG CCCAGGCGTA CCTGAAGGCC TCAAACACAA AATATTTGAG
CCATTTTTCA CCACAAAAAA CAACGGCACC GGCCTTGGTT TGGCGGTGGT TAAGTCGGTC
GTCAATGCGC ACAACGGTAC CCTTAGTGTA TTTAATACAC CTGAAGGCGG CGCTTGCTTT
AGCGTTTCTT TGCCATGCAA AGCGAGTACT CAATCATCAC ATACATTGAC CCATGTTGCG
TAA
 
Protein sequence
MAFDSTPQST EYSASSYALD SIDNAISRDE YDPSSSDDIS SLRLQASRLE HLLQVMPAGV 
IVIDGKGIVR QANEQAKALL GEPLEEEVWR SIITRSFKPR ADDGHEVSLV DGRRVKLSIT
PLENEPGQLI VITDLTETRQ LQARVSHMQR LSSLGKMVAS LAHQIRTPLS AAMLYASNLT
RKGLGQEAQT QFANKLTDRL KELESQVNDM LLFAKSGEEQ VVSQISLGEL FTSIEGSAQT
MIVQAHQTLG FSGFEQEVSI TGNLTALQGA LLNLIHNASQ VTPKGELVAV DASVSGNRLN
IAVTDKGPGV PEGLKHKIFE PFFTTKNNGT GLGLAVVKSV VNAHNGTLSV FNTPEGGACF
SVSLPCKAST QSSHTLTHVA