Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02879 |
Symbol | fliN |
ID | 6775524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3130310 |
End bp | 3130717 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642756328 |
Product | flagellar motor switch protein |
Protein accession | YP_002127169 |
Protein GI | 196157680 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAG ATGGTATGGA CGATTGGGCT GCGGCCATGG CCGAGCAAGC CGAATCTGAA GCTGATCAAG AAGCCGGTGA CAACGAAGAT GTTCAGGTTG CCGAACTTGA CGAGTTAACC GACGATGCGC CGATCACCCA AGAAGAAAAG AAAAAGCTTG ATACGATCCT AGATATTCCC GTGACTATTT CAATGGAAGT AGGTCGTAGT CAAATAAGTA TCCGAAATCT GCTACAGTTG AACCAAGGGT CTGTGGTGGA GCTGGATCGT GTTGCCGGTG AGCCATTAGA TGTATTAGTA AATGGCACGT TGATTGCTCA TGGTGAAGTA GTAGTGGTCA ACGACAAATT CGGTATTCGA TTAACGGATG TTATTAGTCA AATTGAGAGA ATCAAGAAGC TCAGATAA
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Protein sequence | MSEDGMDDWA AAMAEQAESE ADQEAGDNED VQVAELDELT DDAPITQEEK KKLDTILDIP VTISMEVGRS QISIRNLLQL NQGSVVELDR VAGEPLDVLV NGTLIAHGEV VVVNDKFGIR LTDVISQIER IKKLR
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