Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02868 |
Symbol | |
ID | 6775967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3120236 |
End bp | 3120991 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642756317 |
Product | chemotaxis protein cheZ |
Protein accession | YP_002127158 |
Protein GI | 196157669 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG3143] Chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0271753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAACGA ATGTAAACGT TCCAATTTCG TTAGAAGAGG CCAAACAGCT TGTCACCTAT CTGGAAGAAG GTGACAACGC GTCTGCTAAC GCTCTACTTG AAGCTGCCTC AATGAAGGAA AACGTTGAGC TATTTGCTGA AGTAGGAAAG TTAACGCGTC AACTCCATGA CGCGTTAAAT AATTTTCAAA TTGACGACCG CATCAAAAAC TTAGCTACCG ACGATATTCC CGATGCACAA TCCCGCCTAA CCTACGTAAT TGAAGAAACC GAAAAAGCAG CTAATACTAC AATGGACGCT GTGGAAGCGA GTATGCCGAT AGCGGAAATG CTGTCGGTGC GTATCGAAAA AGTGATGCCT GAGTGGAAAA AGCTCATGAA CCGCCAAATC GAGTTGGGCG AGTTCAAAGC GTTATGTGCA GATTTAGACG AATTATTGGA AGACGGTTCG CTTCAGTCAG CTAAACTTAC ACAGTTACTT ACCGAAGTAT TGATGGCTCA AGGCTATCAA GACTTAACGG GTCAAGTTAT CCGTCGCGTT ATCGACCTTG TAAAAGAGGT AGAAGATAGC TTAGTTAATA TGCTAACCAT GTTTGGCGAG CGCGAAGGTG AAGAACAAAC TAAACCATCT AGCGTTAAGG CCGATAAGGT TGATGGTGTA GAGGCAGAAG GCCCAATTAT TGACGCCGAG AAACGCGATG ATGTCGTTTC TGGCCAAGAT GACGTAGATG ATCTTCTGTC TAGCTTAGGT TTTTAG
|
Protein sequence | MTTNVNVPIS LEEAKQLVTY LEEGDNASAN ALLEAASMKE NVELFAEVGK LTRQLHDALN NFQIDDRIKN LATDDIPDAQ SRLTYVIEET EKAANTTMDA VEASMPIAEM LSVRIEKVMP EWKKLMNRQI ELGEFKALCA DLDELLEDGS LQSAKLTQLL TEVLMAQGYQ DLTGQVIRRV IDLVKEVEDS LVNMLTMFGE REGEEQTKPS SVKADKVDGV EAEGPIIDAE KRDDVVSGQD DVDDLLSSLG F
|
| |