Gene MADE_02810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02810 
Symbol 
ID6778485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3058512 
End bp3058907 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content47% 
IMG OID642756257 
ProductTonB2 protein 
Protein accessionYP_002127100 
Protein GI196157611 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.417398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAAG TTGAGCCGGA AACAGCGGAA CCTGATGCAG ATGGCTTTAG CTTAGCTATT 
CCAGCTATCG ACACAGGTGG TGTTGGTGTA AACATTGGTG GTGTTGGTGC TATGCAACGT
GACGGTGAAG CAACACCTAT CGTTCGTATC GACCCGAAAT ATCCACCTGA TGCAGCCCGT
GATGGCCGTG AAGGTTGGGT AAGACTATCT TTTACTATCA ACGAAGTTGG TGGTGTTGAA
GATATCGAAG TTATTGAAGC TGAACCTAAG CGCGTATTCG ACCGTGAAGC ACGTCGTGCT
CTACGTAAGT GGAAATACAA GCCTAAGATC GTTGATGGCA AGCCGGTTAA ACAACCTGGC
ATGTTCGTAC AGCTAGACTT TAAACTGGAG CAATGA
 
Protein sequence
MEQVEPETAE PDADGFSLAI PAIDTGGVGV NIGGVGAMQR DGEATPIVRI DPKYPPDAAR 
DGREGWVRLS FTINEVGGVE DIEVIEAEPK RVFDREARRA LRKWKYKPKI VDGKPVKQPG
MFVQLDFKLE Q