Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02742 |
Symbol | |
ID | 6778927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2985992 |
End bp | 2986624 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642756188 |
Product | ribonuclease T |
Protein accession | YP_002127032 |
Protein GI | 196157543 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCCA ACCCGCCCCT TCTTTCCCAG CGCTTTAGAG GTTATTTCCC TGTAGTTATT GATGTTGAAA CTGCGGGCTT TAATGCGGGA ACCGACGCCT TGCTGGAGCT CGCGGCAGTT ACGGTAAAAA TGGATGACGA CGGCATTCTC CATCCCGATG AAACCTTTCA CTACCATATA GATCCGTTTG AGGGCGCTAA TCTAGAACCC GCAGCGTTGG AATTTAATGG CATCGATCCG AATTGCGCCT TGCGCGGGGC AATTGAAGAA AGTGAAGCCA TGAAGGACTT ATGCAAAGGT ATCCGAAAGG CGCAAAAAAA CGCTGGTTGT CAGCGCTCGG TGATTGTTGC CCACAACGCC ACTTTCGACC AGAGCTTTGT AAATGCGGCA ATAGAGCGTT GTAACATCAA ACGCACGCCG TTTCACCCGT TCGTCTCGTT TGATACCACC AGCCTTGCCG GCCTTGCGTT AGGGCAAACG GTGTTGGTTA AAGCCTGCCG CGCAGCGGGA ATCGCTTTTG ATCAAAGTGA AGCGCACAGC GCACTATACG ATGCCCAAAA AACAACCGAA CTATTTTGCT TTATGGTTAA CCGGTACAAA GCATTAGGCG GATGGCCGGT AGAAAATGAT TAA
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Protein sequence | MSANPPLLSQ RFRGYFPVVI DVETAGFNAG TDALLELAAV TVKMDDDGIL HPDETFHYHI DPFEGANLEP AALEFNGIDP NCALRGAIEE SEAMKDLCKG IRKAQKNAGC QRSVIVAHNA TFDQSFVNAA IERCNIKRTP FHPFVSFDTT SLAGLALGQT VLVKACRAAG IAFDQSEAHS ALYDAQKTTE LFCFMVNRYK ALGGWPVEND
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