Gene MADE_02712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02712 
Symbol 
ID6775156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2951268 
End bp2952749 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content48% 
IMG OID642756157 
Productproline/sodium symporter 
Protein accessionYP_002127002 
Protein GI196157513 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.076903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTTTGT ATTTTGTGGT AATGTTGGGG ATAGGGCTTT TCGCCTATCG GCAAACAGAT 
ACCAACGTTG AGGGCTACAT GCTTGGCGGC CGCCAACTTG GTCCAGCGGT AACCGCACTA
TCAGCAGGTG CATCAGACAT GAGCGGTTGG ATGCTTATGG GCTTACCGGG CGCAATGTAT
GTTTCCGGAC TCTCGGCTGG CTGGATTGCA GTGGGGTTGA CCTTAGGCGC TCTTGCTAAC
TACATGTTAG TGGCACCACG TCTTCGCGTT TACACCGAAG TTGCCAATAA CTCGATTACC
CTGCCCGATT ATTTCGAAAA TCGCTTTGCC GATAATTCTC GCATGCTACG CGTTATAGCG
TCAGTGGTTA TCGTTATTTT CTTTACCCTA TATACCTCTT CGGGCGTAGT CGCAGGCGGC
AAGTTATTTG AAACGTCATT TGGCCTATCG TACGAAGCTG GACTCTATGT AACCGCAGGC
GTTGTAGTGG CCTATACCCT GGTGGGCGGC TTTATGGCAG TGAGCATGAC TGACTTTGTT
CAGGGCTGCA TTATGTTCGT GTCGCTTATT ATGGTCCCTG CTGTTGTTAT CAGTGAATTA
GGCGGCCTAG GTGCCTCAAT CGACGCGCTA GATAACATCA ACCCCGCGTT GTTTGACGCC
TTTATGGATG CATCTTCCAA TGAAGCGCTC ACTGTTATTG GGATAATTTC TCTTATGTCT
TGGGGGCTAG GCTATTTCGG TCAGCCGCAT ATCATTGTGC GCTTTATGGC TATCCGCTCG
GTTAAAGACA TCCCTACAGC CCGCAATATC GGCATGAGCT GGATGATCGT ATCTATCATC
GGCGCGTTAA TGACCGGTTT ATTTGGGTTA GCTTATGTTA CCGGTAACGG CAATGACATT
GACCCAGAAA CCGTCTTTAT TTATCTCTCA CAAATTTTAT TCCACCCGCT AGTGGGTGGG
TTCTTACTTG CCGCCATTTT GGCCGCGATA ATGAGCACTA TTTCTTCTCA GCTATTGGTA
ACATCTAGTT CATTAACCAG TGACTTCTAT CAAGCTTTCT TGCGCCGCGA TGCATCGGAC
GGCGAGCTAG TTATAGCGGG TCGTGTGAGC GTTGTGATAG TCGCACTAGT TGCTATCTAC
CTTGCCTATG ATAGAGACAG CACTATCCTA ACCCTGGTGA GTAATGCGTG GGCAGGCTTT
GGTGCCGCTT TTGGTCCTTT GGTATTATTT AGCTTATTTA AGCGGGAAAT GACTCGTCGC
GCCGCACTAG GTGGAATGAT AGTAGGTGCA GTTACCGTAT TACTTTGGAT TTACCTTCCT
ATTGAAATTG GCGGCCAGCC CTTAGGCGAC TGGATGTATG AAATCGTACC GGGCTTTATA
CTATCTAGCT TAACAATTTT AATTTTAAGT AAATCAGGTA CCCCACGAGA GGGTGTTGTA
GATACCTTTG ATGCGTTTCA AGCTAAACTT GACGAGAGAT AA
 
Protein sequence
MGLYFVVMLG IGLFAYRQTD TNVEGYMLGG RQLGPAVTAL SAGASDMSGW MLMGLPGAMY 
VSGLSAGWIA VGLTLGALAN YMLVAPRLRV YTEVANNSIT LPDYFENRFA DNSRMLRVIA
SVVIVIFFTL YTSSGVVAGG KLFETSFGLS YEAGLYVTAG VVVAYTLVGG FMAVSMTDFV
QGCIMFVSLI MVPAVVISEL GGLGASIDAL DNINPALFDA FMDASSNEAL TVIGIISLMS
WGLGYFGQPH IIVRFMAIRS VKDIPTARNI GMSWMIVSII GALMTGLFGL AYVTGNGNDI
DPETVFIYLS QILFHPLVGG FLLAAILAAI MSTISSQLLV TSSSLTSDFY QAFLRRDASD
GELVIAGRVS VVIVALVAIY LAYDRDSTIL TLVSNAWAGF GAAFGPLVLF SLFKREMTRR
AALGGMIVGA VTVLLWIYLP IEIGGQPLGD WMYEIVPGFI LSSLTILILS KSGTPREGVV
DTFDAFQAKL DER