Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02712 |
Symbol | |
ID | 6775156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2951268 |
End bp | 2952749 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642756157 |
Product | proline/sodium symporter |
Protein accession | YP_002127002 |
Protein GI | 196157513 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.076903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGTTTGT ATTTTGTGGT AATGTTGGGG ATAGGGCTTT TCGCCTATCG GCAAACAGAT ACCAACGTTG AGGGCTACAT GCTTGGCGGC CGCCAACTTG GTCCAGCGGT AACCGCACTA TCAGCAGGTG CATCAGACAT GAGCGGTTGG ATGCTTATGG GCTTACCGGG CGCAATGTAT GTTTCCGGAC TCTCGGCTGG CTGGATTGCA GTGGGGTTGA CCTTAGGCGC TCTTGCTAAC TACATGTTAG TGGCACCACG TCTTCGCGTT TACACCGAAG TTGCCAATAA CTCGATTACC CTGCCCGATT ATTTCGAAAA TCGCTTTGCC GATAATTCTC GCATGCTACG CGTTATAGCG TCAGTGGTTA TCGTTATTTT CTTTACCCTA TATACCTCTT CGGGCGTAGT CGCAGGCGGC AAGTTATTTG AAACGTCATT TGGCCTATCG TACGAAGCTG GACTCTATGT AACCGCAGGC GTTGTAGTGG CCTATACCCT GGTGGGCGGC TTTATGGCAG TGAGCATGAC TGACTTTGTT CAGGGCTGCA TTATGTTCGT GTCGCTTATT ATGGTCCCTG CTGTTGTTAT CAGTGAATTA GGCGGCCTAG GTGCCTCAAT CGACGCGCTA GATAACATCA ACCCCGCGTT GTTTGACGCC TTTATGGATG CATCTTCCAA TGAAGCGCTC ACTGTTATTG GGATAATTTC TCTTATGTCT TGGGGGCTAG GCTATTTCGG TCAGCCGCAT ATCATTGTGC GCTTTATGGC TATCCGCTCG GTTAAAGACA TCCCTACAGC CCGCAATATC GGCATGAGCT GGATGATCGT ATCTATCATC GGCGCGTTAA TGACCGGTTT ATTTGGGTTA GCTTATGTTA CCGGTAACGG CAATGACATT GACCCAGAAA CCGTCTTTAT TTATCTCTCA CAAATTTTAT TCCACCCGCT AGTGGGTGGG TTCTTACTTG CCGCCATTTT GGCCGCGATA ATGAGCACTA TTTCTTCTCA GCTATTGGTA ACATCTAGTT CATTAACCAG TGACTTCTAT CAAGCTTTCT TGCGCCGCGA TGCATCGGAC GGCGAGCTAG TTATAGCGGG TCGTGTGAGC GTTGTGATAG TCGCACTAGT TGCTATCTAC CTTGCCTATG ATAGAGACAG CACTATCCTA ACCCTGGTGA GTAATGCGTG GGCAGGCTTT GGTGCCGCTT TTGGTCCTTT GGTATTATTT AGCTTATTTA AGCGGGAAAT GACTCGTCGC GCCGCACTAG GTGGAATGAT AGTAGGTGCA GTTACCGTAT TACTTTGGAT TTACCTTCCT ATTGAAATTG GCGGCCAGCC CTTAGGCGAC TGGATGTATG AAATCGTACC GGGCTTTATA CTATCTAGCT TAACAATTTT AATTTTAAGT AAATCAGGTA CCCCACGAGA GGGTGTTGTA GATACCTTTG ATGCGTTTCA AGCTAAACTT GACGAGAGAT AA
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Protein sequence | MGLYFVVMLG IGLFAYRQTD TNVEGYMLGG RQLGPAVTAL SAGASDMSGW MLMGLPGAMY VSGLSAGWIA VGLTLGALAN YMLVAPRLRV YTEVANNSIT LPDYFENRFA DNSRMLRVIA SVVIVIFFTL YTSSGVVAGG KLFETSFGLS YEAGLYVTAG VVVAYTLVGG FMAVSMTDFV QGCIMFVSLI MVPAVVISEL GGLGASIDAL DNINPALFDA FMDASSNEAL TVIGIISLMS WGLGYFGQPH IIVRFMAIRS VKDIPTARNI GMSWMIVSII GALMTGLFGL AYVTGNGNDI DPETVFIYLS QILFHPLVGG FLLAAILAAI MSTISSQLLV TSSSLTSDFY QAFLRRDASD GELVIAGRVS VVIVALVAIY LAYDRDSTIL TLVSNAWAGF GAAFGPLVLF SLFKREMTRR AALGGMIVGA VTVLLWIYLP IEIGGQPLGD WMYEIVPGFI LSSLTILILS KSGTPREGVV DTFDAFQAKL DER
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