| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02697 |
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| Symbol | |
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| ID | 6776494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2928688 |
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| End bp | 2933220 |
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| Gene Length | 4533 bp |
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| Protein Length | 1510 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642756142 |
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| Product | sensory box protein |
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| Protein accession | YP_002126987 |
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| Protein GI | 196157498 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTTC TTTTGTTGGC TTTGTCGGGA GTACTTTTTT CTTCCGCAAA GGCGATAGAG
GTTTCTGATC TTCATTTTAC AGAATTAAAT AAGCAACACG GCCTTTCAGA CACTGCAGTA
CTTGATATTG TGGAAGACCA CATGGGCTTT ATTTGGCTGG CAACGTCAAA TGGCCTCAAT
CGCTATTCAG GTTATGACGT AAAGCAATAT CATCCGTCAG ATGTCGACCC GAATTCCTTA
CCTTCAGGTT TCATTAAAAC ATTATTTGTT GATTCAGACG GCAAATTGTG GGTTGGAACC
AATTCTGGTT TGGCGCTCTA TCAGCCAGAG TCAGACAGTT TTAAAGTTTT CAATAAAGAA
AACTCGGTAA TAAAAACAGA TTTAATCACA GCGATTTCTG AGGCGAATAA TGGTGACGTA
CTTTTTTCGG ATAAAAAGTT CCTTTACCGA TATTCGAAAC AAACGTCACA AATAAGCGTT
CTCACCCAAG TTTTTAAAGA CGAAAGCTTT ATAAAAGTTA TCTTTGAAGA AGCTAACCGT
ATATGGGTAG GCTCCAACAA GTTTGGTGCC GCCCTAATAG ATACAGAAAC GCTGGAAGTT
CACGACACAA GCAAAGTCAA CCCCTGGGGC GTCTCTTTAG ATATACGCGC GCTACACGAT
ATAGTCGTGA TTAACGGCAA TTATTGGTTA GCGACAAATG AAGGTCTAAT CGTTTTAGCC
TCTAACGGTC GTATTTTAAA GCGAATTCAA AGCGATGATT TAGGGGTCAA AGAAGAAGTA
AACTCGCTTT CAATCTCTGT AGTGGGTAAA GATATTTGGG TCGGCACTTT TATTGGACTG
TTTTTATTGT CAGATGCTGC TGAAAGCACC ATATCACCTG ATTATCGCCC TGACTTTTTG
CATTTAAATT CAGACACTTA CAGCGCAACT GGCATTCCAT CTGCCATCGT CATGCGAGTG
ATTGAGGACC GGACCGGTGT AGTGTGGGCC GCAACCTTTC ATCGCGGCGC TTTCAAGTAT
CACCCTGAAT ATGCCAGCGT ACATTTTCAA CCCGTTTATA ATTCTGACCG CCATAGCGAC
GATAACTTTT CTACCTTGTG GGGCTTTGCT GAAAGCAGCG ACAAGACACT TTATTTGGTT
TCTCAGCAAA AAGGGCTTGG TAAAATATCT CGGGAAACGG GAAATGTGTC CTTTTACAAC
TTTTTCGAGG AAATGGACCC AGCCATACAC TACTGGGATA TTGAAATTGA TGACCAGGAC
AACATTTGGA TTGCATCCTC TGCAGGCTTA CTCGTCCTAA AGGACAATGG AGACGGCTTG
GAGTTAGTCC ACAAGTATTT TAAAGGTTCA TTTATCGATT ATATCTTTAA AAGTGACTCA
GCCATTTGGC TGCAGGTAGA GGTCGGCCAT GTCTATTCAA TAGACACTAA CTCTGTTTCA
GCACAGATTC AAAATGTTCA AGTATTAAAT ACGGCACTGA CTGGAAAACC GGGCGATATG
CTAGCCATAT ATGAGGATGA CGATAGTAAT ATTTGGTTTA GAGCCGGTAA AAAAATAATA
ATTTATTCTG TTAGCGAGGG CAGAATCATT CAGGTTCTGG ACTCATCAAA TGACATAAAC
TCATTAGTTT ATGGCGTACA TGAAACCCCA TCTGGTTTGT GGTTAACCAC ACGTTCAGAT
GGCGTTATCC AGCTAGACAA AAAAAGCTTT GCCGTACTTA ATAAACAAAA GAGGGACAAT
CAAAGCGGTT TTATCACCTC AACAACGGCG GTGGGAAATA GCATCTGGTA TTCCGATGCC
AAAGGGGTTC ATAAAGTTCA CTTACCGACC CTAAGAGAGG CTGACAGCAT TCCCAATGCA
CAGTTGGAGT TTAATTCTCT TGGTGAAGGC GCTGTAATTA CTACAACTGA TAAGACTATT
TATTTTGGCG GCAATAAAGG CTTTGTTAAA ATTTCAAAGC AAGCAATGAA CGCGAGTGAC
CAGGTCAAAC AAACCCTCCC CCCGCAACTT TATCAAGTTA GCGTGTTTGG CTCAGTGGCA
AAAGCCAGAC AAAAGCAAAT TGAAAGTGAA GACGTTTCAA ATTATCTATC GTTAAAAGAA
AATATCACTT ATGACGAACA GTTAGCGCTA AAGCACGACG AAACCCGCTT TAGTATTTCG
TTTGGACTCG TTAATCCAGT TTATCCAGAC CAAGTAGCTT ACCGATATAA ACTCACTGGT
TTTGAAAGTG ATTGGATTTA TGTTGATAAG GAGCGGAACG CGCAATTCAA CAATATTTCT
TTTGGCAACT ATACCTTTGA AGTTCAAGCC AAAGAGCCGG GTAAAGCGTG GTCTGATAGT
CGAAACTTAC GAATTTCAAT AGACCGCCCC CCCTGGCTTC ACGCGGTAGC GCTGGTTTTT
TATTGCATTG TCGCATTCGC CATACTCGCC TTTATTGTGC GTCAATATCA GATAAGAAAA
GCAAATCAAT TGGCTATTAA GGAGTCTGAA GAGCGCTTAA AGCTTACGCT TTGGAGCTCT
GGCGACGAAC TGTGGGATTG GGATGTATAC CGAGGGCAAG TCTACCGTGC TAATACCTGG
GGCACCTTAG ATTTTCCGCA GGACGATATT CGTACCACCG GCGCGTATGA TGCCAACATT
CATCCTAACG ATATCAATCG GGTAAAGACC GCGTTACGAG AGCATTTAGA GGGGAATAGC
GATTTTTACG AGCTTGCCTA TCGTGCTAAA ACCTTTAAAA ATCAGTGGAT TTGGATATTA
GACCGCGGGA AAGTAGTAGA GCGCGATCAC AACGAGCAGC CAGTGCGAAT GACAGGGACG
CTTAAGAATA TCCACCACCT TAAAGAGGCA GAAGAGCAGC TTAATCTATT TAAACGCTCT
ATTGAAAACA TCTCGGAAGG GGTGTTCATC ACGAATACGC AGTTTAAGTT TATTAGTGTC
AATAACGCTT ACTGCCGCTA TACGGGAGAA ACCCGCGAGC AGGCCCTAGC CAGCTACATG
CACTTCCATT TGTACCCCGA CGCATTTACC GAAGAAATTA AGAAAACCCT TAAAACTAAA
AGCAACTGGT CGGGCGAAGT AGAGAGCGTG CGCGTAAATG GCGAACGTTA TGAAATGGAG
CTTAATATTG ATGCGGTTCA CGATGAAGAC GGAAAAATTA GCCATTTCGT AGGGGTATTT
AGCGATATAA CCTCGCGTAA GAGTACTGAA AAAGAGCTAT TGAAACTCGC TAATGTCGAC
CCGCTCACAG AGCTTCCCAA TCGCTCGTTT TTCCAGGCGA GTCACCAAAA CTTGGTGCGA
AAGGCAGCAC AACACAGCCT GCTTTGCTTA GACATGGATA ACTTCAAAAA GATCAACGAT
TCCCTAGGCC ACCAAACTGG CGATATCTTG ATTAAACAAA TCGCCAAACG GCTACAGCGC
ATTACGGGTA AAAACGCCAC CTGTTATCGC TTAGGTGGCG ATGAATTTAG TATATTGATG
GAAGACAATG CGGATATCCA CACGGTAACC CACTACGCCC AAAACTTACT AGATACCCTG
TCGCGCCCGT TTATTATCAA TAAGCAGGAG TTCGTCCTTG GTGCCAGTAT TGGTATTGCA
TTTTTCCCAG ACGACGGTGA ATCCCCCCAG GAAATGCTGA AAAATGCCGA CACAGCCATG
TACTTTGCCA AAAACAATGG TGGCAATAGC TATCAATTCT TTAGTGGTGA AATGAACCAA
AACGCGGTTA GGCAGCTGCA AATTGAAAAC CTTATTCGCC AAGGCATTAA AGACGATCTG
TTCACTGTGT ATTATCAGCC CAAAGTGGAT ATCGCTTCTG GTAAATTGGT AAGTATGGAA
GCACTGGTAC GTTTTGAGCA CCCGCAAAAA GGCATAGTGA GCCCCGGGCA ATTTATTCCG
TTGGCAGAAC AAACCGGTCA AATTATTGAG ATTGGTGAGC AGGTACTACG TAAAGCCTGT
GCCGATACGA AACGCTGGGT AAATCAAGGG TTATTTAGCG GCCGTGTTGC CGTAAACATT
TCAGCAAAGC AATTTGAGTT GCCAGATTTA GACGACAGGA TAAATAAAAT ACTAAGCGAT
GTGGGTTTGT CACCGCTGCA TTTGGAGTGT GAAATTACCG AAGGTACGCT AATGGAAAGC
CCTGAAAACG GGCTACAAAT GATGACTCGC CTTCGCGAGC GCGGTATTCA CCTTGCGCTA
GATGATTTTG GTACAGGCTA CTCGTCGCTA GCGTATTTAA AACGCTTCCC TTTAAATACC
TTAAAAATCG ATAAAGCCTT TATTGACGAC ATTGCAAAGA GTAACGTCGA CCGTCATATG
GCCGCCGCTA TCATAAACAT TGCCCACAAC TTGGGGCTAA AAGTGGTGGC GGAAGGCGTT
GAAGAAGAGT CTCAACTCGA CATTCTGCGA CGTTATGACT GTGAAATGCT GCAGGGCTTT
CTATATAGCC GCCCGCTTAA CGCAGAGCGC TTTGAAAAAC TGCTAACAGA AAACCAAAAG
CTTCATACTC TTTTAGGTAA TACGCAATTC TAG
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| Protein sequence | MLLLLLALSG VLFSSAKAIE VSDLHFTELN KQHGLSDTAV LDIVEDHMGF IWLATSNGLN
RYSGYDVKQY HPSDVDPNSL PSGFIKTLFV DSDGKLWVGT NSGLALYQPE SDSFKVFNKE
NSVIKTDLIT AISEANNGDV LFSDKKFLYR YSKQTSQISV LTQVFKDESF IKVIFEEANR
IWVGSNKFGA ALIDTETLEV HDTSKVNPWG VSLDIRALHD IVVINGNYWL ATNEGLIVLA
SNGRILKRIQ SDDLGVKEEV NSLSISVVGK DIWVGTFIGL FLLSDAAEST ISPDYRPDFL
HLNSDTYSAT GIPSAIVMRV IEDRTGVVWA ATFHRGAFKY HPEYASVHFQ PVYNSDRHSD
DNFSTLWGFA ESSDKTLYLV SQQKGLGKIS RETGNVSFYN FFEEMDPAIH YWDIEIDDQD
NIWIASSAGL LVLKDNGDGL ELVHKYFKGS FIDYIFKSDS AIWLQVEVGH VYSIDTNSVS
AQIQNVQVLN TALTGKPGDM LAIYEDDDSN IWFRAGKKII IYSVSEGRII QVLDSSNDIN
SLVYGVHETP SGLWLTTRSD GVIQLDKKSF AVLNKQKRDN QSGFITSTTA VGNSIWYSDA
KGVHKVHLPT LREADSIPNA QLEFNSLGEG AVITTTDKTI YFGGNKGFVK ISKQAMNASD
QVKQTLPPQL YQVSVFGSVA KARQKQIESE DVSNYLSLKE NITYDEQLAL KHDETRFSIS
FGLVNPVYPD QVAYRYKLTG FESDWIYVDK ERNAQFNNIS FGNYTFEVQA KEPGKAWSDS
RNLRISIDRP PWLHAVALVF YCIVAFAILA FIVRQYQIRK ANQLAIKESE ERLKLTLWSS
GDELWDWDVY RGQVYRANTW GTLDFPQDDI RTTGAYDANI HPNDINRVKT ALREHLEGNS
DFYELAYRAK TFKNQWIWIL DRGKVVERDH NEQPVRMTGT LKNIHHLKEA EEQLNLFKRS
IENISEGVFI TNTQFKFISV NNAYCRYTGE TREQALASYM HFHLYPDAFT EEIKKTLKTK
SNWSGEVESV RVNGERYEME LNIDAVHDED GKISHFVGVF SDITSRKSTE KELLKLANVD
PLTELPNRSF FQASHQNLVR KAAQHSLLCL DMDNFKKIND SLGHQTGDIL IKQIAKRLQR
ITGKNATCYR LGGDEFSILM EDNADIHTVT HYAQNLLDTL SRPFIINKQE FVLGASIGIA
FFPDDGESPQ EMLKNADTAM YFAKNNGGNS YQFFSGEMNQ NAVRQLQIEN LIRQGIKDDL
FTVYYQPKVD IASGKLVSME ALVRFEHPQK GIVSPGQFIP LAEQTGQIIE IGEQVLRKAC
ADTKRWVNQG LFSGRVAVNI SAKQFELPDL DDRINKILSD VGLSPLHLEC EITEGTLMES
PENGLQMMTR LRERGIHLAL DDFGTGYSSL AYLKRFPLNT LKIDKAFIDD IAKSNVDRHM
AAAIINIAHN LGLKVVAEGV EEESQLDILR RYDCEMLQGF LYSRPLNAER FEKLLTENQK
LHTLLGNTQF
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