| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02686 |
|---|
| Symbol | |
|---|
| ID | 6775243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2919685 |
|---|
| End bp | 2920104 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642756131 |
|---|
| Product | Biopolymer transport protein |
|---|
| Protein accession | YP_002126976 |
|---|
| Protein GI | 196157487 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02801] TolR protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00153637 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGTAA GAAAACGCCG CAGACCGGTA TCAGAGATAA ATGTAGTACC TTACATCGAC
GTTATGTTGG TGCTGCTTAT CATCTTTATG GTAACGGCGC CGCTTATTTC TCAAGGGGTA
AAAGTTGATT TGCCTAAGGC GAGCGCTAAC CCTATTGAAC AGGAAGATAA CCCACCTATT
ATTGCCTCGG TCGATGTGAA AGGTCGCTAT TTCCTGAACG TGGGAGACGA CCAAGAATCG
CCCATAAGCC AAGATGAACT AGGTGCAATT GTTAAGGCTC AACTCACTAA AGAGCCGAAC
ACGCCGGTGG TAGTGAAAGG CGATGGGCAA GTGGCGTACA ACGAAGTAAT ACAGTTAATG
GTATTGTTAC AGCAAGCGGG CGTGCCTTCG GTAGGGTTAA TGACCGATCC CGTTGAGTAA
|
|---|
| Protein sequence | MYVRKRRRPV SEINVVPYID VMLVLLIIFM VTAPLISQGV KVDLPKASAN PIEQEDNPPI
IASVDVKGRY FLNVGDDQES PISQDELGAI VKAQLTKEPN TPVVVKGDGQ VAYNEVIQLM
VLLQQAGVPS VGLMTDPVE
|
|---|
| |