| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02626 |
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| Symbol | |
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| ID | 6776087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2847615 |
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| End bp | 2849669 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642756067 |
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| Product | GGDEF/EAL domain protein |
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| Protein accession | YP_002126916 |
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| Protein GI | 196157427 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0230406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAC AACAAAATGT GCGAAGGTTA CACTGGTTGA ACACTAATCA AGAATCAATC
CCTAAGGTTG AAATAGAACG CGACACCACA GACATGTTAA TAGGCAACAG TTTCGTCGGT
TTGTTGATGA CTATATTTGC CTTTTCTGGC CTTGTCTTTT TCTTTGAAAG TGAATCTCCC
GCTGCGTTTC ACCAAAAGTT CCAGCTATGG GTAATTATGG TAGGCGTTTG CCTTGCGCGG
TTAATAGATT CGATTTATTG GCGAATAAAC CTAGCAGGCA GGGCTTACCG CCCACGTCCA
GCGTTAATAC GATTTGCTGC TGGCTTATAT GTCACCGGCA GCTTGTGGGC GATTTACTCT
GTTAGCTTTT ACAACGCCAT GTCTACCACT GAACTGGCGG CAACTATGGT GGTACTGGCT
GCTATGGCGG GTGGCGCCGG GACCGTTCTT TCACCTAATA AAAACTTGGT CGGCTTTTAT
TCTACCGCCC TACTCGTGCC TATGTCTTTA TGCGCTCTTC TCGATGAAAG CGAGAAGTTT
TTTATTTTAG GGGTTCTTGG GCTGGTCTTT TGGTTTGGCA TCTTTACCAG CGCATTTCGC
TACCACAAGT TTTTTATTAA CACGTTGCAC CTCAAAGCTA AAAACAATAG TTTAGTGGAG
CAAATGAAAG TTGAACGTAG TGAAACCGAA AAAGTTAATC AGTTACTTAT TGCCTCTAAT
CAAAAACTCG ATGCCTCAAA TATAAACCTT GAAGCAGAGG TGGAGCGCAG AACGGCGGAG
CTTTACCGAC TTTCAAACAG AGATCCCCTC ACTGACTTAC TTAACAGAAA TGGTTTTTTA
AAGCACTTAA ATAAACTTAT CGATACCACT CGCGCACTGG AAAACTCGCT AGCCGTTCTT
TTTATTGATT TAGACGGTTT TAAACAGGTA AATGACAGCC TAGGTCACAA AATAGGTGAT
ATCGTGCTAG CAGAAATTGC CAAACGGCTG CGTAACTATA CCGAAGACAA TCACTTAGGA
CGTTGGGGCG GTGACGAATT TGTTGCTGTC ATTCCCTACG CCAACGTAGA CACGGCAAAA
GCCGTTGCAC ATGCCATGCG AAGCGGCGTT ACCGTTCCTA TTGTTGCAAA CGACAATCAA
ATAACGCTAG ATGCCACCAT TGGTATTGCC ATGTTCCCCG ACCATGGAGA TACCGCCTTA
GCATTAATAC AGCAAGCCGA TCTCACTATG TATGACCAAA AGCGAAAGCA CCGTGGGTCA
ATAGGCGTGT TTAGTGAAGC CTTGCACAAA GAGATAAAAA TAGAGCAGCG TTTATGTGAG
CGCCTTCGCT CTGCGATAGA TAAAGGAGAG CTTGCGGTTC ATTATCAGCC TATTATTGAC
GTTAGCACTA ACGCGCTATC GTCGGTTGAG GCACTGTTAC GGTGGACATG TGACAACGAG
AAAATTCCTC CCACCGTTTT TATACCACTT GCTGAACGAA GCGGCTTGAT GCCAGAGATT
GGTGCGTGGG TATTGAACAG AGCACTTATC GACTTATCTC ACTGGCAGCT TAATCAAGAG
CTAGCAATAT CGCTTAATGT ATCGGTCGCA CAGCTGCTCG ACGACAGTTT TTTCAAATCA
CTAGACAATG TCCTCTTATC TACGAAAGTA TCACCAGAGC GACTGCATTT AGAGGTAACT
GAAAGTGTAT TTGCCATCGA TAAGAATGTC GTGAGCAGAA GAGTAAGCGA CCTTGTTAAG
CGCAATGTAA AGATATCTAT TGACGATTTT GGTACTGGGT ATTCTTCGTT AAGCCGACTT
CAGTCGATAC CATTTGACTT TATAAAAATA GATCGCTCTT TTGTACAGAA TAGCTCTGAA
GAGAGTGATA CCATAATACG GGCTACACTT TTAATGGCAA AAGAGTTTGG CTGTAAAACT
ATAGCAGAGG GCATAGAAAC CGACGAGCAA AGGCAGCACC TCGCTCGCCT CGGTACCGAC
TATTTGCAAG GTTTTTACTT CGCCAAACCT ATGAATGCTC ACGATTTTAT TTCTTGGTAT
AACGAAAACT ACTAA
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| Protein sequence | MEQQQNVRRL HWLNTNQESI PKVEIERDTT DMLIGNSFVG LLMTIFAFSG LVFFFESESP
AAFHQKFQLW VIMVGVCLAR LIDSIYWRIN LAGRAYRPRP ALIRFAAGLY VTGSLWAIYS
VSFYNAMSTT ELAATMVVLA AMAGGAGTVL SPNKNLVGFY STALLVPMSL CALLDESEKF
FILGVLGLVF WFGIFTSAFR YHKFFINTLH LKAKNNSLVE QMKVERSETE KVNQLLIASN
QKLDASNINL EAEVERRTAE LYRLSNRDPL TDLLNRNGFL KHLNKLIDTT RALENSLAVL
FIDLDGFKQV NDSLGHKIGD IVLAEIAKRL RNYTEDNHLG RWGGDEFVAV IPYANVDTAK
AVAHAMRSGV TVPIVANDNQ ITLDATIGIA MFPDHGDTAL ALIQQADLTM YDQKRKHRGS
IGVFSEALHK EIKIEQRLCE RLRSAIDKGE LAVHYQPIID VSTNALSSVE ALLRWTCDNE
KIPPTVFIPL AERSGLMPEI GAWVLNRALI DLSHWQLNQE LAISLNVSVA QLLDDSFFKS
LDNVLLSTKV SPERLHLEVT ESVFAIDKNV VSRRVSDLVK RNVKISIDDF GTGYSSLSRL
QSIPFDFIKI DRSFVQNSSE ESDTIIRATL LMAKEFGCKT IAEGIETDEQ RQHLARLGTD
YLQGFYFAKP MNAHDFISWY NENY
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